RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	YLR126C	Q12288	251 aa		5.28	□□□□□ -1.56
TFB4	YPR056W	YPR064W	Q12492	139 aa		5.28	□□□□□ -1.56
TFB4	YPR056W	STH1	P32597	1359 aa		5.28	□□□□□ -1.56
TFB4	YPR056W	SSC1	P0CS90	654 aa	Known RBP	5.27	□□□□□ -1.57
TFB4	YPR056W	SEC22	P22214	214 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	YCR007C	P25354	239 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	SNC1	P31109	117 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	YEF1	P32622	495 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	GPX2	P38143	162 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	ATG12	P38316	186 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	RRP3	P38712	501 aa	Known RBP	5.27	□□□□□ -1.57
TFB4	YPR056W	FMP32	P43557	207 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	GAT1	P43574	510 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	WWM1	P43582	211 aa	Known RBP	5.27	□□□□□ -1.57
TFB4	YPR056W	AIM23	P47015	356 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	UBC13	P52490	153 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	FYV6	P53913	173 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	AIM34	Q03673	198 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	YMR166C	Q03829	368 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	BCH1	Q05029	724 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	DIC1	Q06143	298 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	YLR012C	Q07927	99 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	TAF10	Q12030	206 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	YLR361C-A	Q3E795	98 aa		5.27	□□□□□ -1.57
TFB4	YPR056W	SPT3	P06844	337 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	YOL163W	P0CF20	169 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	EXO70	P19658	623 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	IFM1	P25038	676 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	MGT1	P26188	188 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	TIR2	P33890	251 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	YNK1	P36010	153 aa	Known RBP	5.26	□□□□□ -1.57
TFB4	YPR056W	YKL075C	P36083	450 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	VPS52	P39904	641 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	KRE29	P40026	464 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	GUF1	P46943	645 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	POP6	P53218	158 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	TRM44	Q02648	567 aa	Known RBP	5.26	□□□□□ -1.57
TFB4	YPR056W	RNY1	Q02933	434 aa	Known RBP	5.26	□□□□□ -1.57
TFB4	YPR056W	TAZ1	Q06510	381 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	YDL218W	Q07629	317 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	RDI1	Q12434	202 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	AGC1	Q12482	902 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	YPL119C-A	Q3E751	87 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	Q0144	Q9ZZW2	109 aa		5.26	□□□□□ -1.57
TFB4	YPR056W	CDC8	P00572	216 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	EXG1	P23776	448 aa	Known RBP	5.25	□□□□□ -1.57
TFB4	YPR056W	HSP30	P25619	332 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	TAH1	P25638	111 aa	Predicted RBP	5.25	□□□□□ -1.57
TFB4	YPR056W	WSC4	P38739	605 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	YIL169C	P40442	995 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	PCI8	P40512	444 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	DFG10	P40526	253 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	PDR17	P53844	350 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	TMA20	P89886	181 aa	Predicted RBP	5.25	□□□□□ -1.57
TFB4	YPR056W	DYN2	Q02647	92 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	YMR279C	Q03263	540 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	TDA1	Q03533	586 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	GAS2	Q06135	555 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	MMT2	Q08970	484 aa		5.25	□□□□□ -1.57
TFB4	YPR056W	YAR066W	P0CX18	203 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	YHR214W	P0CX19	203 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	CSG2	P35206	410 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	SPC34	P36131	295 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	YKR041W	P36134	250 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	MRPL3	P36516	390 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	TES1	P41903	349 aa	Known RBP	5.24	□□□□□ -1.57
TFB4	YPR056W	CTK3	P46963	296 aa	Predicted RBP	5.24	□□□□□ -1.57
TFB4	YPR056W	ORC5	P50874	479 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	YPS5	P53057	165 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	VHT1	P53241	593 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	YNR048W	P53740	393 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	DYN3	Q04949	312 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	GLO2	Q05584	274 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	MRX9	Q07349	420 aa	Known RBP	5.24	□□□□□ -1.57
TFB4	YPR056W	RDL2	Q08742	149 aa	Known RBP	5.24	□□□□□ -1.57
TFB4	YPR056W	EDE1	P34216	1381 aa		5.24	□□□□□ -1.57
TFB4	YPR056W	TOP2	P06786	1428 aa	Known RBP	5.23	□□□□□ -1.57
TFB4	YPR056W	SAL1	D6W196	494 aa		5.23	□□□□□ -1.57
TFB4	YPR056W	GLN3	P18494	730 aa		5.23	□□□□□ -1.57
TFB4	YPR056W	DBF2	P22204	572 aa		5.23	□□□□□ -1.57
TFB4	YPR056W	MAK32	P23060	363 aa		5.23	□□□□□ -1.57
TFB4	YPR056W	MRPL28	P36527	147 aa		5.23	□□□□□ -1.57
TFB4	YPR056W	OPY1	P38271	328 aa		5.23	□□□□□ -1.57
TFB4	YPR056W	PSA1	P41940	361 aa	Known RBP	5.23	□□□□□ -1.57
TFB4	YPR056W	MAK3	Q03503	176 aa		5.23	□□□□□ -1.57
TFB4	YPR056W	WIP1	Q2V2P8	89 aa		5.23	□□□□□ -1.57
TFB4	YPR056W	BI3	Q9ZZW7	517 aa		5.23	□□□□□ -1.57
TFB4	YPR056W	SNT2	P53127	1403 aa		5.23	□□□□□ -1.57
TFB4	YPR056W	REP1	P03871	373 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	CAP2	P13517	287 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	CTA1	P15202	515 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	ERD1	P16151	362 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	GRX2	P17695	143 aa	Known RBP	5.22	□□□□□ -1.57
TFB4	YPR056W	TRX3	P25372	127 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	BUB2	P26448	306 aa	Predicted RBP	5.22	□□□□□ -1.57
TFB4	YPR056W	COQ3	P27680	312 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	ECM33	P38248	429 aa	Known RBP	5.22	□□□□□ -1.57
TFB4	YPR056W	ARC40	P38328	384 aa	Known RBP	5.22	□□□□□ -1.57
TFB4	YPR056W	YHR127W	P38833	243 aa	Known RBP	5.22	□□□□□ -1.57
TFB4	YPR056W	CSM2	P40465	213 aa		5.22	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms