RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	RRF1	P38771	230 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	GEP4	P38812	185 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	YEL068C	P39977	110 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	LTP1	P40347	161 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	CAT5	P41735	233 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	RPL10	P41805	221 aa	Known RBP	4.97	□□□□□ -1.61
HFI1	YPL254W	COS10	P52924	374 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	PAU12	P53343	120 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	ERG13	P54839	491 aa	Known RBP	4.97	□□□□□ -1.61
HFI1	YPL254W	DML1	Q03652	475 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	YMR130W	Q04223	302 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	YML096W	Q04489	525 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	FRE3	Q08905	711 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	INP53	Q12271	1107 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	MSB2	P32334	1306 aa		4.97	□□□□□ -1.61
HFI1	YPL254W	ADK1	P07170	222 aa	Known RBP	4.96	□□□□□ -1.62
HFI1	YPL254W	DSF1	P0CX08	502 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	YNR073C	P0CX09	502 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	PDA1	P16387	420 aa	Known RBP	4.96	□□□□□ -1.62
HFI1	YPL254W	PHO80	P20052	293 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	SRY1	P36007	326 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	TEF4	P36008	412 aa	Known RBP	4.96	□□□□□ -1.62
HFI1	YPL254W	PEX32	P38292	413 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	RFC4	P40339	323 aa	Known RBP	4.96	□□□□□ -1.62
HFI1	YPL254W	MNT3	P40549	630 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	ECM27	P47144	725 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	PMT5	P52867	743 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	SCS7	Q03529	384 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	INP1	Q03694	420 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	VBA1	Q04301	562 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	RRN11	Q04712	507 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	YMR315W	Q04869	349 aa	Known RBP	4.96	□□□□□ -1.62
HFI1	YPL254W	SWT1	Q12104	458 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	TMS1	Q12116	473 aa		4.96	□□□□□ -1.62
HFI1	YPL254W	YML003W	P0CF16	290 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	CBS1	P14066	229 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	ACB1	P31787	87 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	SFC1	P33303	322 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	TRM7	P38238	310 aa	Known RBP	4.95	□□□□□ -1.62
HFI1	YPL254W	ALP1	P38971	573 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	RTT105	P40063	208 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	MOB1	P40484	314 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	MSY1	P48527	492 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	SAY1	P53324	424 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	INN1	P53901	409 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	YLR352W	Q06479	807 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	SYC1	Q08553	188 aa	Predicted RBP	4.95	□□□□□ -1.62
HFI1	YPL254W	FEX1	Q08913	375 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	MMT2	Q08970	484 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	YOR289W	Q12012	251 aa	Predicted RBP	4.95	□□□□□ -1.62
HFI1	YPL254W	RDI1	Q12434	202 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	NAG1	Q8TGN9	163 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	YOS9	Q99220	542 aa		4.95	□□□□□ -1.62
HFI1	YPL254W	YBR085C-A	O43137	85 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	NHP6B	P11633	99 aa	Known RBP	4.94	□□□□□ -1.62
HFI1	YPL254W	SPT15	P13393	240 aa	Known RBP	4.94	□□□□□ -1.62
HFI1	YPL254W	AAC3	P18238	307 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	RPB5	P20434	215 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	UTR1	P21373	530 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
HFI1	YPL254W	SUI1	P32911	108 aa	Known RBP	4.94	□□□□□ -1.62
HFI1	YPL254W	PDR3	P33200	976 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	PTI1	P39927	425 aa	Predicted RBP	4.94	□□□□□ -1.62
HFI1	YPL254W	HXT9	P40885	567 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	RPE1	P46969	238 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	AIM25	P47140	327 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	ASI3	P53983	676 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	GAS2	Q06135	555 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	TAZ1	Q06510	381 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	YDL211C	Q12121	372 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	FRE6	Q12473	712 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	INH1	P01097	85 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	DPM1	P14020	267 aa	Known RBP	4.94	□□□□□ -1.62
HFI1	YPL254W	RPL3	P14126	387 aa	Known RBP	4.94	□□□□□ -1.62
HFI1	YPL254W	PUT3	P25502	979 aa	Predicted RBP	4.94	□□□□□ -1.62
HFI1	YPL254W	PBN1	P25580	416 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	NAM9	P27929	486 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	KRE6	P32486	720 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	DOA4	P32571	926 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	PAU2	P32612	120 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	PTR2	P32901	601 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	MDL1	P33310	695 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	WBP1	P33767	430 aa	Known RBP	4.94	□□□□□ -1.62
HFI1	YPL254W	DOA1	P36037	715 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	YER184C	P39961	794 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	YGL101W	P53144	215 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	POP6	P53218	158 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	FMP48	P53233	369 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	PRM15	Q03262	622 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	KEI1	Q06346	221 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	FDH1	Q08911	376 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	FEX2	Q08991	375 aa		4.94	□□□□□ -1.62
HFI1	YPL254W	PRB1	P09232	635 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	YGL041W-A	P0C5N3	154 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	RED1	P14291	827 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	FPR1	P20081	114 aa	Known RBP	4.93	□□□□□ -1.62
HFI1	YPL254W	MCK1	P21965	375 aa	Known RBP	4.93	□□□□□ -1.62
HFI1	YPL254W	MAG1	P22134	296 aa	Known RBP	4.93	□□□□□ -1.62
HFI1	YPL254W	GPI12	P23797	304 aa		4.93	□□□□□ -1.62
HFI1	YPL254W	MGR1	P25573	417 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms