RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C VPS68Q12016 184 aa0.73□□□□□ -2.29
NIP100YPL174C ATG5Q12380 294 aa0.73□□□□□ -2.29
NIP100YPL174C MHT1Q12525 324 aa0.73□□□□□ -2.29
NIP100YPL174C TFS1P14306 219 aa0.72□□□□□ -2.29
NIP100YPL174C AEP1P32493 518 aa0.72□□□□□ -2.29
NIP100YPL174C SFC1P33303 322 aa0.72□□□□□ -2.29
NIP100YPL174C YHI9P38765 294 aa0.72□□□□□ -2.29
NIP100YPL174C YJR146WP47174 117 aa0.72□□□□□ -2.29
NIP100YPL174C VPS60Q03390 229 aa0.72□□□□□ -2.29
NIP100YPL174C ECM18Q04623 453 aa0.72□□□□□ -2.29
NIP100YPL174C PEX10Q05568 337 aa0.72□□□□□ -2.29
NIP100YPL174C BER1Q06688 274 aaKnown RBP0.72□□□□□ -2.29
NIP100YPL174C YOR114WQ12219 294 aa0.72□□□□□ -2.29
NIP100YPL174C PAA1Q12447 191 aaKnown RBP0.72□□□□□ -2.29
NIP100YPL174C MON2P48563 1636 aaPredicted RBP0.72□□□□□ -2.29
NIP100YPL174C GAL7P08431 366 aa0.72□□□□□ -2.29
NIP100YPL174C UIP5P36137 443 aa0.72□□□□□ -2.29
NIP100YPL174C YJL118WP47022 219 aa0.72□□□□□ -2.29
NIP100YPL174C TIM21P53220 239 aa0.72□□□□□ -2.29
NIP100YPL174C CPD1P53314 239 aa0.72□□□□□ -2.29
NIP100YPL174C STE23Q06010 1027 aa0.72□□□□□ -2.29
NIP100YPL174C PUT1P09368 476 aa0.71□□□□□ -2.3
NIP100YPL174C GPI12P23797 304 aa0.71□□□□□ -2.3
NIP100YPL174C RPC25P35718 212 aa0.71□□□□□ -2.3
NIP100YPL174C ARN2P38724 620 aa0.71□□□□□ -2.3
NIP100YPL174C YPT32P51996 222 aaKnown RBP0.71□□□□□ -2.3
NIP100YPL174C PEX31P53203 462 aa0.71□□□□□ -2.3
NIP100YPL174C SLX9P53251 210 aaPredicted RBP0.71□□□□□ -2.3
NIP100YPL174C PER33Q12144 273 aa0.71□□□□□ -2.3
NIP100YPL174C EMC6Q12431 108 aa0.71□□□□□ -2.3
NIP100YPL174C YJL027CP47063 138 aaPredicted RBP0.71□□□□□ -2.3
NIP100YPL174C YJL016WP47072 561 aa0.71□□□□□ -2.3
NIP100YPL174C GTO1P48239 356 aa0.71□□□□□ -2.3
NIP100YPL174C GCD2P12754 651 aaPredicted RBP0.7□□□□□ -2.3
NIP100YPL174C YNL050CP53952 270 aa0.7□□□□□ -2.3
NIP100YPL174C ABZ2Q03266 374 aa0.7□□□□□ -2.3
NIP100YPL174C CTS2Q06350 511 aa0.7□□□□□ -2.3
NIP100YPL174C IRC20Q06554 1556 aa0.7□□□□□ -2.3
NIP100YPL174C CUP1-1P0CX80 61 aa0.7□□□□□ -2.3
NIP100YPL174C CUP1-2P0CX81 61 aa0.7□□□□□ -2.3
NIP100YPL174C DPM1P14020 267 aaKnown RBP0.7□□□□□ -2.3
NIP100YPL174C GRE3P38715 327 aaKnown RBP RIP-Chip data0.7□□□□□ -2.3not detected
NIP100YPL174C AGP3P43548 558 aa0.7□□□□□ -2.3
NIP100YPL174C RIB4P50861 169 aaPredicted RBP0.7□□□□□ -2.3
NIP100YPL174C DBP6P53734 629 aaKnown RBP0.7□□□□□ -2.3
NIP100YPL174C PRM15Q03262 622 aa0.7□□□□□ -2.3
NIP100YPL174C YMR114CQ04471 368 aaKnown RBP0.7□□□□□ -2.3
NIP100YPL174C CWP1P28319 239 aa0.69□□□□□ -2.3
NIP100YPL174C SSH1P38353 490 aaKnown RBP0.69□□□□□ -2.3
NIP100YPL174C VTC1P40046 129 aaRIP-Chip data0.69□□□□□ -2.3 RIP-Chip
NIP100YPL174C MND1P53102 219 aa0.69□□□□□ -2.3
NIP100YPL174C FMP41P53889 259 aaKnown RBP0.69□□□□□ -2.3
NIP100YPL174C FCF1Q05498 189 aaPredicted RBP0.69□□□□□ -2.3
NIP100YPL174C YSR3P23501 404 aa0.69□□□□□ -2.3
NIP100YPL174C YOR062CP36025 268 aa0.69□□□□□ -2.3
NIP100YPL174C YDR089WP38966 869 aa0.69□□□□□ -2.3
NIP100YPL174C NPT1P39683 429 aaKnown RBP0.69□□□□□ -2.3
NIP100YPL174C MRPL49P40858 161 aaPredicted RBP0.69□□□□□ -2.3
NIP100YPL174C OST3P48439 350 aa0.69□□□□□ -2.3
NIP100YPL174C COS6P53344 381 aa0.69□□□□□ -2.3
NIP100YPL174C YDR286CQ05530 114 aa0.69□□□□□ -2.3
NIP100YPL174C RRG8Q06109 277 aa0.69□□□□□ -2.3
NIP100YPL174C BOP2Q06150 570 aa0.69□□□□□ -2.3
NIP100YPL174C AGC1Q12482 902 aa0.69□□□□□ -2.3
NIP100YPL174C BOL1Q3E793 110 aa0.69□□□□□ -2.3
NIP100YPL174C SAS5Q99314 248 aa0.69□□□□□ -2.3
NIP100YPL174C NUM1Q00402 2748 aa0.69□□□□□ -2.3
NIP100YPL174C DRE2P36152 348 aa0.68□□□□□ -2.3
NIP100YPL174C HIS2P38635 335 aa0.68□□□□□ -2.3
NIP100YPL174C SNX4P47057 423 aa0.68□□□□□ -2.3
NIP100YPL174C YJL028WP47062 111 aa0.68□□□□□ -2.3
NIP100YPL174C MDY2Q12285 212 aa0.68□□□□□ -2.3
NIP100YPL174C VMA2P16140 517 aaKnown RBP0.68□□□□□ -2.3
NIP100YPL174C ATG15P25641 520 aa0.68□□□□□ -2.3
NIP100YPL174C MPP10P47083 593 aaKnown RBP0.68□□□□□ -2.3
NIP100YPL174C SEC10Q06245 871 aa0.68□□□□□ -2.3
NIP100YPL174C CTR3Q06686 241 aa0.68□□□□□ -2.3
NIP100YPL174C BBP1Q12365 385 aa0.68□□□□□ -2.3
NIP100YPL174C RPS3P05750 240 aaKnown RBP0.68□□□□□ -2.3
NIP100YPL174C PET494P07390 489 aaPredicted RBP0.68□□□□□ -2.3
NIP100YPL174C HEK2P38199 381 aaKnown RBP RIP-Chip data0.68□□□□□ -2.3not detected
NIP100YPL174C TEM1P38987 245 aa0.68□□□□□ -2.3
NIP100YPL174C YHB1P39676 399 aaKnown RBP0.68□□□□□ -2.3
NIP100YPL174C COG3P40094 801 aa0.68□□□□□ -2.3
NIP100YPL174C MRX5P47007 382 aa0.68□□□□□ -2.3
NIP100YPL174C VPS20Q04272 221 aa0.68□□□□□ -2.3
NIP100YPL174C SFH1Q06168 426 aa0.68□□□□□ -2.3
NIP100YPL174C GEP5Q12393 293 aa0.68□□□□□ -2.3
NIP100YPL174C PEX3P28795 441 aa0.67□□□□□ -2.3
NIP100YPL174C DOA4P32571 926 aa0.67□□□□□ -2.3
NIP100YPL174C CSG2P35206 410 aa0.67□□□□□ -2.3
NIP100YPL174C HMT1P38074 348 aa0.67□□□□□ -2.3
NIP100YPL174C MNN9P39107 395 aaKnown RBP0.67□□□□□ -2.3
NIP100YPL174C VAC14Q06708 880 aa0.67□□□□□ -2.3
NIP100YPL174C YPL247CQ12523 523 aa0.67□□□□□ -2.3
NIP100YPL174C YOS9Q99220 542 aa0.67□□□□□ -2.3
NIP100YPL174C DNF1P32660 1571 aa0.67□□□□□ -2.3
NIP100YPL174C OPI1P21957 404 aa0.67□□□□□ -2.3
NIP100YPL174C SHC1P39000 512 aa0.67□□□□□ -2.3
NIP100YPL174C OSW5P40219 148 aa0.67□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms