RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W FRT2P39734 528 aa2.25□□□□□ -2.05
MRPL40YPL173W SMB1P40018 196 aaKnown RBP2.25□□□□□ -2.05
MRPL40YPL173W KRE29P40026 464 aa2.25□□□□□ -2.05
MRPL40YPL173W FMC1P40491 155 aa2.25□□□□□ -2.05
MRPL40YPL173W YIL012WP40551 113 aa2.25□□□□□ -2.05
MRPL40YPL173W DSN1P40568 576 aa2.25□□□□□ -2.05
MRPL40YPL173W COQ5P49017 307 aa2.25□□□□□ -2.05
MRPL40YPL173W PRP24P49960 444 aaKnown RBP2.25□□□□□ -2.05
MRPL40YPL173W UFD1P53044 361 aa2.25□□□□□ -2.05
MRPL40YPL173W YGL118CP53132 145 aa2.25□□□□□ -2.05
MRPL40YPL173W FMP41P53889 259 aaKnown RBP2.25□□□□□ -2.05
MRPL40YPL173W MRS2Q01926 470 aa2.25□□□□□ -2.05
MRPL40YPL173W YDL144CQ07589 356 aa2.25□□□□□ -2.05
MRPL40YPL173W AI5_BETAQ9ZZX0 354 aa2.25□□□□□ -2.05
MRPL40YPL173W CFT1Q06632 1357 aaKnown RBP2.24□□□□□ -2.05
MRPL40YPL173W MRP1P10662 321 aaKnown RBP2.24□□□□□ -2.05
MRPL40YPL173W CDC42P19073 191 aa2.24□□□□□ -2.05
MRPL40YPL173W IMP1P28627 190 aa2.24□□□□□ -2.05
MRPL40YPL173W POP8P38208 133 aa2.24□□□□□ -2.05
MRPL40YPL173W EDC2P40023 145 aaPredicted RBP2.24□□□□□ -2.05
MRPL40YPL173W YER085CP40058 173 aa2.24□□□□□ -2.05
MRPL40YPL173W YIL054WP40524 105 aa2.24□□□□□ -2.05
MRPL40YPL173W RPL10P41805 221 aaKnown RBP2.24□□□□□ -2.05
MRPL40YPL173W YFL012WP43580 148 aa2.24□□□□□ -2.05
MRPL40YPL173W YJR012CP47087 207 aa2.24□□□□□ -2.05
MRPL40YPL173W CAX4P53223 239 aa2.24□□□□□ -2.05
MRPL40YPL173W SMD1Q02260 146 aaPredicted RBP2.24□□□□□ -2.05
MRPL40YPL173W EBS1Q03466 884 aaKnown RBP2.24□□□□□ -2.05
MRPL40YPL173W YLR283WQ05867 314 aa2.24□□□□□ -2.05
MRPL40YPL173W PAM18Q07914 168 aa2.24□□□□□ -2.05
MRPL40YPL173W CSM4Q08955 156 aa2.24□□□□□ -2.05
MRPL40YPL173W YDL211CQ12121 372 aa2.24□□□□□ -2.05
MRPL40YPL173W TDH2P00358 332 aaKnown RBP2.23□□□□□ -2.05
MRPL40YPL173W COS2P0CX12 379 aa2.23□□□□□ -2.05
MRPL40YPL173W COS3P0CX13 379 aa2.23□□□□□ -2.05
MRPL40YPL173W MATALPHA1P0CY06 175 aa2.23□□□□□ -2.05
MRPL40YPL173W HMLALPHA1P0CY07 175 aa2.23□□□□□ -2.05
MRPL40YPL173W RPL4AP10664 362 aaKnown RBP2.23□□□□□ -2.05
MRPL40YPL173W FUS3P16892 353 aaKnown RBP2.23□□□□□ -2.05
MRPL40YPL173W RPO26P20435 155 aa2.23□□□□□ -2.05
MRPL40YPL173W YCR016WP25617 290 aaKnown RBP2.23□□□□□ -2.05
MRPL40YPL173W MSN4P33749 630 aa2.23□□□□□ -2.05
MRPL40YPL173W YBR096WP38256 230 aa2.23□□□□□ -2.05
MRPL40YPL173W MED8P38304 223 aa2.23□□□□□ -2.05
MRPL40YPL173W YHL049CP38722 271 aa2.23□□□□□ -2.05
MRPL40YPL173W COS4P43542 379 aa2.23□□□□□ -2.05
MRPL40YPL173W RPL4BP49626 362 aaKnown RBP2.23□□□□□ -2.05
MRPL40YPL173W COG7P53195 279 aa2.23□□□□□ -2.05
MRPL40YPL173W YNL095CP53932 642 aa2.23□□□□□ -2.05
MRPL40YPL173W CTF19Q02732 369 aa2.23□□□□□ -2.05
MRPL40YPL173W MYO5Q04439 1219 aaKnown RBP2.23□□□□□ -2.05
MRPL40YPL173W ARC18Q05933 178 aaKnown RBP2.23□□□□□ -2.05
MRPL40YPL173W YMR316C-AI2HB70 103 aa2.22□□□□□ -2.05
MRPL40YPL173W TCP1P12612 559 aaKnown RBP2.22□□□□□ -2.05
MRPL40YPL173W PHO80P20052 293 aa2.22□□□□□ -2.05
MRPL40YPL173W PRE7P23724 241 aaKnown RBP2.22□□□□□ -2.05
MRPL40YPL173W HOM6P31116 359 aaKnown RBP2.22□□□□□ -2.05
MRPL40YPL173W TPS2P31688 896 aaKnown RBP2.22□□□□□ -2.05
MRPL40YPL173W CAT2P32796 670 aaKnown RBP2.22□□□□□ -2.05
MRPL40YPL173W MID2P36027 376 aa2.22□□□□□ -2.05
MRPL40YPL173W HMT1P38074 348 aa2.22□□□□□ -2.05
MRPL40YPL173W YBL081WP38180 368 aaKnown RBP2.22□□□□□ -2.05
MRPL40YPL173W LDB7P38210 180 aa2.22□□□□□ -2.05
MRPL40YPL173W YHL044WP38727 235 aa2.22□□□□□ -2.05
MRPL40YPL173W AVT6P40074 448 aa2.22□□□□□ -2.05
MRPL40YPL173W SYS1P41544 203 aa2.22□□□□□ -2.05
MRPL40YPL173W HOC1P47124 396 aa2.22□□□□□ -2.05
MRPL40YPL173W JHD2P47156 728 aaPredicted RBP2.22□□□□□ -2.05
MRPL40YPL173W HSH155P49955 971 aaKnown RBP2.22□□□□□ -2.05
MRPL40YPL173W OSH6Q02201 448 aa2.22□□□□□ -2.05
MRPL40YPL173W RLP24Q07915 199 aaKnown RBP2.22□□□□□ -2.05
MRPL40YPL173W RUD3Q12234 484 aaKnown RBP2.22□□□□□ -2.05
MRPL40YPL173W ATG5Q12380 294 aa2.22□□□□□ -2.05
MRPL40YPL173W SNF8Q12483 233 aa2.22□□□□□ -2.05
MRPL40YPL173W ARG80P07249 177 aa2.21□□□□□ -2.06
MRPL40YPL173W CPT1P17898 393 aa2.21□□□□□ -2.06
MRPL40YPL173W CKA2P19454 339 aa2.21□□□□□ -2.06
MRPL40YPL173W OSM1P21375 501 aaKnown RBP2.21□□□□□ -2.06
MRPL40YPL173W RNA15P25299 296 aaPredicted RBP2.21□□□□□ -2.06
MRPL40YPL173W CAM1P29547 415 aaKnown RBP2.21□□□□□ -2.06
MRPL40YPL173W KRE6P32486 720 aa2.21□□□□□ -2.06
MRPL40YPL173W HEK2P38199 381 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
MRPL40YPL173W TRR2P38816 342 aa2.21□□□□□ -2.06
MRPL40YPL173W RTR1P40084 226 aaPredicted RBP2.21□□□□□ -2.06
MRPL40YPL173W GCN20P43535 752 aaKnown RBP2.21□□□□□ -2.06
MRPL40YPL173W FLC3P53121 802 aa2.21□□□□□ -2.06
MRPL40YPL173W HST4P53688 370 aa2.21□□□□□ -2.06
MRPL40YPL173W NOP13P53883 403 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
MRPL40YPL173W YMR166CQ03829 368 aa2.21□□□□□ -2.06
MRPL40YPL173W KRE28Q04431 385 aa2.21□□□□□ -2.06
MRPL40YPL173W MRX8Q05473 314 aa2.21□□□□□ -2.06
MRPL40YPL173W PLB3Q08108 686 aa2.21□□□□□ -2.06
MRPL40YPL173W YPL264CQ08980 353 aa2.21□□□□□ -2.06
MRPL40YPL173W YPL119C-AQ3E751 87 aa2.21□□□□□ -2.06
MRPL40YPL173W CUP2P15315 225 aa2.2□□□□□ -2.06
MRPL40YPL173W VPS3P23643 1011 aa2.2□□□□□ -2.06
MRPL40YPL173W JEN1P36035 616 aa2.2□□□□□ -2.06
MRPL40YPL173W MSS2P40990 351 aa2.2□□□□□ -2.06
MRPL40YPL173W OTU1P43558 301 aa2.2□□□□□ -2.06
MRPL40YPL173W MRPL50P53724 139 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 44.3 ms