RNA–Protein interactions for RNA: YLR410W

VIP1, Transcript of Inositol hexakisphosphate and inositol heptakisphosphate kinase, yeast

Gene VIP1, Length 3,441 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VIP1	YLR410W	RNA15	P25299	296 aa	Predicted RBP	2.78	□□□□□ -1.96
VIP1	YLR410W	CHA1	P25379	360 aa	Known RBP	2.78	□□□□□ -1.96
VIP1	YLR410W	RPS5	P26783	225 aa	Known RBP	2.78	□□□□□ -1.96
VIP1	YLR410W	VMA6	P32366	345 aa	Known RBP	2.78	□□□□□ -1.96
VIP1	YLR410W	MRPL10	P36520	322 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	OPY1	P38271	328 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	MOB2	P43563	287 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	PMT4	P46971	762 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	JHD2	P47156	728 aa	Predicted RBP	2.78	□□□□□ -1.96
VIP1	YLR410W	UBC13	P52490	153 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	CUS2	P53830	285 aa	Predicted RBP	2.78	□□□□□ -1.96
VIP1	YLR410W	PEX30	Q06169	523 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	ILV6	P25605	309 aa	Known RBP	2.78	□□□□□ -1.96
VIP1	YLR410W	SMB1	P40018	196 aa	Known RBP	2.78	□□□□□ -1.96
VIP1	YLR410W	PCI8	P40512	444 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	GLG2	P47011	380 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	ALG13	P53178	202 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	TPC1	P53257	314 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	CRH1	P53301	507 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	MAL13	P53338	473 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	LOT6	Q07923	191 aa		2.78	□□□□□ -1.96
VIP1	YLR410W	HTB1	P02293	131 aa	Known RBP	2.77	□□□□□ -1.97
VIP1	YLR410W	HTB2	P02294	131 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	SPS19	P32573	292 aa	Known RBP	2.77	□□□□□ -1.97
VIP1	YLR410W	CSE2	P33308	149 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	BMT2	P38278	337 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	BIR1	P47134	954 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	RHO3	Q00245	231 aa	Known RBP	2.77	□□□□□ -1.97
VIP1	YLR410W	ARC18	Q05933	178 aa	Known RBP	2.77	□□□□□ -1.97
VIP1	YLR410W	ATP16	Q12165	160 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	RPS3	P05750	240 aa	Known RBP	2.77	□□□□□ -1.97
VIP1	YLR410W	RPL27A	P0C2H6	136 aa	Known RBP	2.77	□□□□□ -1.97
VIP1	YLR410W	RPL27B	P0C2H7	136 aa	Known RBP	2.77	□□□□□ -1.97
VIP1	YLR410W	SOP4	P39543	234 aa	Predicted RBP	2.77	□□□□□ -1.97
VIP1	YLR410W	RRS1	Q08746	203 aa	Known RBP	2.77	□□□□□ -1.97
VIP1	YLR410W	SRO7	Q12038	1033 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	LAG2	Q92325	660 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	RNA14	P25298	677 aa	Known RBP	2.77	□□□□□ -1.97
VIP1	YLR410W	GIT1	P25346	518 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	VAC7	P53950	1165 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	SUR7	P54003	302 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	YLR283W	Q05867	314 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	SPO77	Q06134	477 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	RIF2	Q06208	395 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	MFG1	Q07684	458 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	YOR376W	Q08900	122 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	YPL278C	Q08990	100 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	YOR114W	Q12219	294 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	SEY1	Q99287	776 aa		2.77	□□□□□ -1.97
VIP1	YLR410W	ATR1	P13090	542 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	YIL012W	P40551	113 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	HYR1	P40581	163 aa	Known RBP	2.76	□□□□□ -1.97
VIP1	YLR410W	AIM23	P47015	356 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	ADO1	P47143	340 aa	Known RBP	2.76	□□□□□ -1.97
VIP1	YLR410W	YPT32	P51996	222 aa	Known RBP	2.76	□□□□□ -1.97
VIP1	YLR410W	IBD2	P53892	351 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	YGK3	Q12222	375 aa	Predicted RBP	2.76	□□□□□ -1.97
VIP1	YLR410W	MIR1	P23641	311 aa	Known RBP	2.76	□□□□□ -1.97
VIP1	YLR410W	SGE1	P33335	543 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	JEN1	P36035	616 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	YAT2	P40017	923 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	HOC1	P47124	396 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	HSH155	P49955	971 aa	Known RBP	2.76	□□□□□ -1.97
VIP1	YLR410W	USE1	P53146	245 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	RPM2	Q02773	1202 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	MRX9	Q07349	420 aa	Known RBP	2.76	□□□□□ -1.97
VIP1	YLR410W	YLR012C	Q07927	99 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	NAG1	Q8TGN9	163 aa		2.76	□□□□□ -1.97
VIP1	YLR410W	NAM9	P27929	486 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	URA10	P30402	227 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	SEC1	P30619	724 aa	Known RBP	2.75	□□□□□ -1.97
VIP1	YLR410W	PDC2	P32896	925 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
VIP1	YLR410W	HOP2	P53187	214 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	YGR018C	P53211	109 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	NOP19	P53317	196 aa	Predicted RBP	2.75	□□□□□ -1.97
VIP1	YLR410W	RAD50	P12753	1312 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	MSI1	P13712	422 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	MCH2	P36032	473 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	COX15	P40086	486 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	YFR057W	P43625	151 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	RTT103	Q05543	409 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	YLR126C	Q12288	251 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	BI3	Q9ZZW7	517 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	HHF1	P02309	103 aa	Known RBP	2.75	□□□□□ -1.97
VIP1	YLR410W	KSS1	P14681	368 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	PPH21	P23594	369 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	FUN26	P31381	517 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	VPS21	P36017	210 aa	Known RBP	2.75	□□□□□ -1.97
VIP1	YLR410W	YDR115W	Q04598	105 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	LIP2	Q06005	328 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	MIM1	Q08176	113 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	ESA1	Q08649	445 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	IZH2	Q12442	317 aa		2.75	□□□□□ -1.97
VIP1	YLR410W	CDC10	P25342	322 aa	Known RBP	2.74	□□□□□ -1.97
VIP1	YLR410W	CDC13	P32797	924 aa	Known RBP	2.74	□□□□□ -1.97
VIP1	YLR410W	CAB3	P36076	571 aa		2.74	□□□□□ -1.97
VIP1	YLR410W	PTH1	P38876	190 aa	Known RBP	2.74	□□□□□ -1.97
VIP1	YLR410W	ASG7	P46993	209 aa		2.74	□□□□□ -1.97
VIP1	YLR410W	HAM1	P47119	197 aa	Known RBP	2.74	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms