RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W RHO1P06780 209 aaKnown RBP1.73□□□□□ -2.13
MSL1YIR009W ZRC1P20107 442 aa1.73□□□□□ -2.13
MSL1YIR009W PPA2P28239 310 aa1.73□□□□□ -2.13
MSL1YIR009W RCK1P38622 512 aa1.73□□□□□ -2.13
MSL1YIR009W ALD5P40047 520 aaKnown RBP1.73□□□□□ -2.13
MSL1YIR009W DDI1P40087 428 aa1.73□□□□□ -2.13
MSL1YIR009W UTP18P40362 594 aaPredicted RBP1.73□□□□□ -2.13
MSL1YIR009W MSS2P40990 351 aa1.73□□□□□ -2.13
MSL1YIR009W RPL10P41805 221 aaKnown RBP1.73□□□□□ -2.13
MSL1YIR009W FMP48P53233 369 aa1.73□□□□□ -2.13
MSL1YIR009W MNT4P53745 580 aa1.73□□□□□ -2.13
MSL1YIR009W YNR066CP53752 436 aa1.73□□□□□ -2.13
MSL1YIR009W NOP13P53883 403 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
MSL1YIR009W EBS1Q03466 884 aaKnown RBP1.73□□□□□ -2.13
MSL1YIR009W INP1Q03694 420 aa1.73□□□□□ -2.13
MSL1YIR009W FAR10Q06001 478 aa1.73□□□□□ -2.13
MSL1YIR009W YLR446WQ06204 433 aa1.73□□□□□ -2.13
MSL1YIR009W PLP2Q12017 286 aa1.73□□□□□ -2.13
MSL1YIR009W YOR114WQ12219 294 aa1.73□□□□□ -2.13
MSL1YIR009W SNF8Q12483 233 aa1.73□□□□□ -2.13
MSL1YIR009W PRM4Q12498 284 aa1.73□□□□□ -2.13
MSL1YIR009W USO1P25386 1790 aa1.72□□□□□ -2.13
MSL1YIR009W RPP0P05317 312 aaKnown RBP1.72□□□□□ -2.13
MSL1YIR009W RPS3P05750 240 aaKnown RBP1.72□□□□□ -2.13
MSL1YIR009W NHP6BP11633 99 aaKnown RBP1.72□□□□□ -2.13
MSL1YIR009W YCR025CP25352 136 aa1.72□□□□□ -2.13
MSL1YIR009W GPX1P36014 167 aa1.72□□□□□ -2.13
MSL1YIR009W BMT2P38278 337 aa1.72□□□□□ -2.13
MSL1YIR009W MIC12P38341 106 aa1.72□□□□□ -2.13
MSL1YIR009W PRS2P38620 318 aaKnown RBP1.72□□□□□ -2.13
MSL1YIR009W SIP3P38717 1229 aa1.72□□□□□ -2.13
MSL1YIR009W YIL012WP40551 113 aa1.72□□□□□ -2.13
MSL1YIR009W GCN20P43535 752 aaKnown RBP1.72□□□□□ -2.13
MSL1YIR009W OTU1P43558 301 aa1.72□□□□□ -2.13
MSL1YIR009W ASG7P46993 209 aa1.72□□□□□ -2.13
MSL1YIR009W YPT32P51996 222 aaKnown RBP1.72□□□□□ -2.13
MSL1YIR009W CGR1P53188 120 aa1.72□□□□□ -2.13
MSL1YIR009W MAL13P53338 473 aa1.72□□□□□ -2.13
MSL1YIR009W ZRG17P53735 605 aa1.72□□□□□ -2.13
MSL1YIR009W PGA2P53903 129 aa1.72□□□□□ -2.13
MSL1YIR009W YNL095CP53932 642 aa1.72□□□□□ -2.13
MSL1YIR009W ASI3P53983 676 aa1.72□□□□□ -2.13
MSL1YIR009W RMI1Q02685 241 aa1.72□□□□□ -2.13
MSL1YIR009W YMR244WQ04018 355 aa1.72□□□□□ -2.13
MSL1YIR009W GTO3Q04806 366 aa1.72□□□□□ -2.13
MSL1YIR009W YOR292CQ08743 309 aa1.72□□□□□ -2.13
MSL1YIR009W VIK1Q12045 647 aa1.72□□□□□ -2.13
MSL1YIR009W YPL245WQ12179 454 aaKnown RBP1.72□□□□□ -2.13
MSL1YIR009W ADF1Q2V2Q1 113 aa1.72□□□□□ -2.13
MSL1YIR009W YPL119C-AQ3E751 87 aa1.72□□□□□ -2.13
MSL1YIR009W TAO3P40468 2376 aa1.72□□□□□ -2.13
MSL1YIR009W FLO11P08640 1367 aa1.72□□□□□ -2.13
MSL1YIR009W STH1P32597 1359 aa1.72□□□□□ -2.13
MSL1YIR009W TOR2P32600 2474 aaKnown RBP1.72□□□□□ -2.13
MSL1YIR009W RPO21P04050 1733 aaKnown RBP1.71□□□□□ -2.13
MSL1YIR009W PDR12Q02785 1511 aa1.71□□□□□ -2.14
MSL1YIR009W CCH1P50077 2039 aa1.71□□□□□ -2.14
MSL1YIR009W YMR316C-AI2HB70 103 aa1.71□□□□□ -2.14
MSL1YIR009W PET494P07390 489 aaPredicted RBP1.71□□□□□ -2.14
MSL1YIR009W ASP3-2P0CX77 362 aa1.71□□□□□ -2.14
MSL1YIR009W ASP3-3P0CX78 362 aa1.71□□□□□ -2.14
MSL1YIR009W ASP3-4P0CX79 362 aa1.71□□□□□ -2.14
MSL1YIR009W ASP3-1P0CZ17 362 aa1.71□□□□□ -2.14
MSL1YIR009W DAL81P21657 970 aa1.71□□□□□ -2.14
MSL1YIR009W RNA15P25299 296 aaPredicted RBP1.71□□□□□ -2.14
MSL1YIR009W IMP1P28627 190 aa1.71□□□□□ -2.14
MSL1YIR009W QRI5P32344 111 aa1.71□□□□□ -2.14
MSL1YIR009W MAL32P38158 584 aa1.71□□□□□ -2.14
MSL1YIR009W SHE1P38200 338 aa1.71□□□□□ -2.14
MSL1YIR009W OM14P38325 134 aa1.71□□□□□ -2.14
MSL1YIR009W SEN34P39707 275 aa1.71□□□□□ -2.14
MSL1YIR009W VAB2P40003 282 aa1.71□□□□□ -2.14
MSL1YIR009W AVT7P40501 490 aa1.71□□□□□ -2.14
MSL1YIR009W TPN1P53099 579 aa1.71□□□□□ -2.14
MSL1YIR009W COG7P53195 279 aa1.71□□□□□ -2.14
MSL1YIR009W MAL12P53341 584 aa1.71□□□□□ -2.14
MSL1YIR009W KTR6P54070 446 aa1.71□□□□□ -2.14
MSL1YIR009W TPS1Q00764 495 aaKnown RBP1.71□□□□□ -2.14
MSL1YIR009W API2Q04413 109 aa1.71□□□□□ -2.14
MSL1YIR009W SEC13Q04491 297 aaKnown RBP1.71□□□□□ -2.14
MSL1YIR009W TAF9Q05027 157 aa1.71□□□□□ -2.14
MSL1YIR009W YOL029CQ08187 201 aa1.71□□□□□ -2.14
MSL1YIR009W TSC11P40061 1430 aa1.71□□□□□ -2.14
MSL1YIR009W GCN1P33892 2672 aaKnown RBP1.71□□□□□ -2.14
MSL1YIR009W YRF1-2P40105 1681 aa1.71□□□□□ -2.14
MSL1YIR009W THP2O13539 261 aaKnown RBP1.7□□□□□ -2.14
MSL1YIR009W COQ1P18900 473 aa1.7□□□□□ -2.14
MSL1YIR009W EPT1P22140 391 aa1.7□□□□□ -2.14
MSL1YIR009W IFM1P25038 676 aa1.7□□□□□ -2.14
MSL1YIR009W JEN1P36035 616 aa1.7□□□□□ -2.14
MSL1YIR009W CBT1P36038 271 aaPredicted RBP1.7□□□□□ -2.14
MSL1YIR009W FRM2P37261 193 aa1.7□□□□□ -2.14
MSL1YIR009W HEK2P38199 381 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
MSL1YIR009W RFT1P38206 574 aaPredicted RBP1.7□□□□□ -2.14
MSL1YIR009W GPI18P38211 433 aa1.7□□□□□ -2.14
MSL1YIR009W GGC1P38988 300 aa1.7□□□□□ -2.14
MSL1YIR009W YER184CP39961 794 aa1.7□□□□□ -2.14
MSL1YIR009W SMB1P40018 196 aaKnown RBP1.7□□□□□ -2.14
MSL1YIR009W THO1P40040 218 aaKnown RBP1.7□□□□□ -2.14
MSL1YIR009W SER33P40510 469 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 75.2 ms