RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC97	YHR172W	MNN10	P50108	393 aa	Known RBP	4.75	□□□□□ -1.65
SPC97	YHR172W	UBC13	P52490	153 aa		4.75	□□□□□ -1.65
SPC97	YHR172W	YIP1	P53039	248 aa		4.75	□□□□□ -1.65
SPC97	YHR172W	YNL040W	P53960	456 aa	Predicted RBP	4.75	□□□□□ -1.65
SPC97	YHR172W	TDA1	Q03533	586 aa		4.75	□□□□□ -1.65
SPC97	YHR172W	MMT2	Q08970	484 aa		4.75	□□□□□ -1.65
SPC97	YHR172W	YLR126C	Q12288	251 aa		4.75	□□□□□ -1.65
SPC97	YHR172W	SUA7	P29055	345 aa	Predicted RBP	4.74	□□□□□ -1.65
SPC97	YHR172W	SPT4	P32914	102 aa	Predicted RBP	4.74	□□□□□ -1.65
SPC97	YHR172W	MRPL3	P36516	390 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
SPC97	YHR172W	ECM33	P38248	429 aa	Known RBP	4.74	□□□□□ -1.65
SPC97	YHR172W	YHI9	P38765	294 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	YIL060W	P40519	144 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	RHO3	Q00245	231 aa	Known RBP	4.74	□□□□□ -1.65
SPC97	YHR172W	RNY1	Q02933	434 aa	Known RBP	4.74	□□□□□ -1.65
SPC97	YHR172W	TPO3	Q06451	622 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	CDC28	P00546	298 aa	Known RBP	4.74	□□□□□ -1.65
SPC97	YHR172W	MCK1	P21965	375 aa	Known RBP	4.74	□□□□□ -1.65
SPC97	YHR172W	CPR3	P25719	182 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	YEF1	P32622	495 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	FMP23	P38231	175 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	YPC1	P38298	316 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	IPI1	P38803	334 aa	Predicted RBP	4.74	□□□□□ -1.65
SPC97	YHR172W	GAT1	P43574	510 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	MCM22	P47167	239 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	HCH1	P53834	153 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	SWP1	Q02795	286 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	TDA6	Q06466	467 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	RAX2	Q12465	1220 aa		4.74	□□□□□ -1.65
SPC97	YHR172W	AIR2	Q12476	344 aa	Known RBP	4.74	□□□□□ -1.65
SPC97	YHR172W	CMD1	P06787	147 aa	Known RBP	4.73	□□□□□ -1.65
SPC97	YHR172W	ERD1	P16151	362 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	EPT1	P22140	391 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	YCR006C	P25350	157 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	ARO7	P32178	256 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	THI80	P35202	319 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	RBL2	P48606	106 aa	Known RBP	4.73	□□□□□ -1.65
SPC97	YHR172W	HNT1	Q04344	158 aa	Known RBP	4.73	□□□□□ -1.65
SPC97	YHR172W	YPR091C	Q06833	770 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	THI72	Q08579	599 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	ERV2	Q12284	196 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	YPL119C-A	Q3E751	87 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	POM152	P39685	1337 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	YCR023C	P25351	611 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	GEP4	P38812	185 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	RGI1	P40043	161 aa	Predicted RBP	4.73	□□□□□ -1.65
SPC97	YHR172W	CPR7	P47103	393 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	ECL1	P48235	211 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	FRE4	P53746	719 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	BET5	Q03630	159 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	YOL024W	Q08172	172 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	FYV7	Q12247	151 aa		4.73	□□□□□ -1.65
SPC97	YHR172W	MET2	P08465	486 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	TRX3	P25372	127 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	GSP1	P32835	219 aa	Known RBP	4.72	□□□□□ -1.65
SPC97	YHR172W	GSP2	P32836	220 aa	Known RBP	4.72	□□□□□ -1.65
SPC97	YHR172W	YCR041W	P37265	110 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	GPX2	P38143	162 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	ATG12	P38316	186 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	ARC40	P38328	384 aa	Known RBP	4.72	□□□□□ -1.65
SPC97	YHR172W	YHK8	P38776	514 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	PDS1	P40316	373 aa	Predicted RBP	4.72	□□□□□ -1.65
SPC97	YHR172W	MOB2	P43563	287 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	YLR030W	Q07967	263 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	MRX4	Q12467	430 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	YOR304C-A	O14468	76 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	RAS1	P01119	309 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	BUD23	P25627	275 aa	Predicted RBP	4.72	□□□□□ -1.65
SPC97	YHR172W	INO2	P26798	304 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	TRM7	P38238	310 aa	Known RBP	4.72	□□□□□ -1.65
SPC97	YHR172W	MTC4	P38335	694 aa	Known RBP	4.72	□□□□□ -1.65
SPC97	YHR172W	WWM1	P43582	211 aa	Known RBP	4.72	□□□□□ -1.65
SPC97	YHR172W	VHT1	P53241	593 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	UBC7	Q02159	165 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	RUB1	Q03919	77 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	BNA5	Q05979	453 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	TAZ1	Q06510	381 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	YDL199C	Q12407	687 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	SLO1	Q3E784	85 aa		4.72	□□□□□ -1.65
SPC97	YHR172W	YCR007C	P25354	239 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	SNC1	P31109	117 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	MRPL17	P36528	281 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	SLM6	P38343	150 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	MDM31	P38880	579 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	MST28	P39552	234 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	FCY21	P40039	528 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	DFG10	P40526	253 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	PSA1	P41940	361 aa	Known RBP	4.71	□□□□□ -1.65
SPC97	YHR172W	YFL015C	P43578	164 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	SOL4	P53315	255 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	YMR027W	Q04371	470 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	RDL2	Q08742	149 aa	Known RBP	4.71	□□□□□ -1.65
SPC97	YHR172W	PEX11	Q12462	236 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	IGO2	Q9P305	131 aa		4.71	□□□□□ -1.65
SPC97	YHR172W	TVP38	P36164	337 aa		4.71	□□□□□ -1.66
SPC97	YHR172W	YHR127W	P38833	243 aa	Known RBP	4.71	□□□□□ -1.66
SPC97	YHR172W	NVJ1	P38881	321 aa		4.71	□□□□□ -1.66
SPC97	YHR172W	LSM4	P40070	187 aa	Known RBP	4.71	□□□□□ -1.66
SPC97	YHR172W	TDA10	P42938	290 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms