RNA–Protein interactions for RNA: YFL008W

SMC1, Transcript of Subunit of the multiprotein cohesin complex, yeastyeast

Gene SMC1, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC1YFL008W VMA6P32366 345 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W DOA4P32571 926 aa0.9□□□□□ -2.27
SMC1YFL008W LAS1P36146 502 aaPredicted RBP0.9□□□□□ -2.27
SMC1YFL008W AIM29P36154 155 aa0.9□□□□□ -2.27
SMC1YFL008W MRPL15P36523 253 aa0.9□□□□□ -2.27
SMC1YFL008W POP8P38208 133 aa0.9□□□□□ -2.27
SMC1YFL008W SHG1P38337 142 aa0.9□□□□□ -2.27
SMC1YFL008W YMR262WP38430 313 aa0.9□□□□□ -2.27
SMC1YFL008W YDR089WP38966 869 aa0.9□□□□□ -2.27
SMC1YFL008W RGI1P40043 161 aaPredicted RBP0.9□□□□□ -2.27
SMC1YFL008W YER084WP40057 128 aa0.9□□□□□ -2.27
SMC1YFL008W PRE6P40303 254 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W SOK1P40317 901 aa0.9□□□□□ -2.27
SMC1YFL008W SWC4P53201 476 aa0.9□□□□□ -2.27
SMC1YFL008W YGR026WP53217 278 aa0.9□□□□□ -2.27
SMC1YFL008W NQM1P53228 333 aaPredicted RBP0.9□□□□□ -2.27
SMC1YFL008W HST4P53688 370 aa0.9□□□□□ -2.27
SMC1YFL008W DID2P69771 204 aa0.9□□□□□ -2.27
SMC1YFL008W YDR222WQ04925 415 aa0.9□□□□□ -2.27
SMC1YFL008W GAS2Q06135 555 aa0.9□□□□□ -2.27
SMC1YFL008W IES4Q08561 116 aa0.9□□□□□ -2.27
SMC1YFL008W YPL150WQ12152 901 aa0.9□□□□□ -2.27
SMC1YFL008W DCN1Q12395 269 aa0.9□□□□□ -2.27
SMC1YFL008W ATG31Q12421 196 aa0.9□□□□□ -2.27
SMC1YFL008W PRM4Q12498 284 aa0.9□□□□□ -2.27
SMC1YFL008W HTZ1Q12692 134 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W EFG1Q3E705 233 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W RPL25P04456 142 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W PDE2P06776 526 aa0.9□□□□□ -2.27
SMC1YFL008W CBF1P17106 351 aa0.9□□□□□ -2.27
SMC1YFL008W SAG1P20840 650 aa0.9□□□□□ -2.27
SMC1YFL008W SCL1P21243 252 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W MIR1P23641 311 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W RBK1P25332 333 aa0.9□□□□□ -2.27
SMC1YFL008W GIT1P25346 518 aa0.9□□□□□ -2.27
SMC1YFL008W MID2P36027 376 aa0.9□□□□□ -2.27
SMC1YFL008W VMA7P39111 118 aa0.9□□□□□ -2.27
SMC1YFL008W LCB2P40970 561 aa0.9□□□□□ -2.27
SMC1YFL008W MSS2P40990 351 aa0.9□□□□□ -2.27
SMC1YFL008W YFL067WP43537 175 aa0.9□□□□□ -2.27
SMC1YFL008W MIC19P43594 170 aa0.9□□□□□ -2.27
SMC1YFL008W LOH1P47055 219 aa0.9□□□□□ -2.27
SMC1YFL008W YJR141WP47172 347 aaPredicted RBP0.9□□□□□ -2.27
SMC1YFL008W CCC1P47818 322 aa0.9□□□□□ -2.27
SMC1YFL008W PRP24P49960 444 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W YGR017WP53210 297 aa0.9□□□□□ -2.27
SMC1YFL008W OKP1P53298 406 aa0.9□□□□□ -2.27
SMC1YFL008W TRM82Q03774 444 aa0.9□□□□□ -2.27
SMC1YFL008W PKR1Q03880 122 aaKnown RBP0.9□□□□□ -2.27
SMC1YFL008W GPI17Q04080 534 aa0.9□□□□□ -2.27
SMC1YFL008W CSM3Q04659 317 aa0.9□□□□□ -2.27
SMC1YFL008W GAL83Q04739 417 aa0.9□□□□□ -2.27
SMC1YFL008W PEX10Q05568 337 aa0.9□□□□□ -2.27
SMC1YFL008W NEJ1Q06148 342 aa0.9□□□□□ -2.27
SMC1YFL008W ASR1Q06834 288 aa0.9□□□□□ -2.27
SMC1YFL008W YOR289WQ12012 251 aaPredicted RBP0.9□□□□□ -2.27
SMC1YFL008W YOR114WQ12219 294 aa0.9□□□□□ -2.27
SMC1YFL008W HMS1Q12398 434 aa0.9□□□□□ -2.27
SMC1YFL008W TRM10Q12400 293 aa0.9□□□□□ -2.27
SMC1YFL008W COA6Q3E846 104 aa0.9□□□□□ -2.27
SMC1YFL008W NAG1Q8TGN9 163 aa0.9□□□□□ -2.27
SMC1YFL008W YCL001W-BQ96VH2 84 aa0.9□□□□□ -2.27
SMC1YFL008W RPS14AP06367 137 aaKnown RBP0.89□□□□□ -2.27
SMC1YFL008W ATP1P07251 545 aaKnown RBP0.89□□□□□ -2.27
SMC1YFL008W MAS1P10507 462 aa0.89□□□□□ -2.27
SMC1YFL008W PET54P10834 293 aa0.89□□□□□ -2.27
SMC1YFL008W RPL24BP24000 155 aaKnown RBP0.89□□□□□ -2.27
SMC1YFL008W MNE1P24720 663 aa0.89□□□□□ -2.27
SMC1YFL008W IFM1P25038 676 aa0.89□□□□□ -2.27
SMC1YFL008W ATG15P25641 520 aa0.89□□□□□ -2.27
SMC1YFL008W CSM1P25651 190 aa0.89□□□□□ -2.27
SMC1YFL008W DBF4P32325 704 aa0.89□□□□□ -2.27
SMC1YFL008W CDC13P32797 924 aaKnown RBP0.89□□□□□ -2.27
SMC1YFL008W PTM1P32857 523 aa0.89□□□□□ -2.27
SMC1YFL008W RPS1AP33442 255 aaKnown RBP0.89□□□□□ -2.27
SMC1YFL008W NTC20P38302 140 aaPredicted RBP0.89□□□□□ -2.27
SMC1YFL008W RPS14BP39516 138 aaKnown RBP0.89□□□□□ -2.27
SMC1YFL008W YGL101WP53144 215 aa0.89□□□□□ -2.27
SMC1YFL008W YGR042WP53227 271 aa0.89□□□□□ -2.27
SMC1YFL008W ERV25P54837 211 aaKnown RBP0.89□□□□□ -2.27
SMC1YFL008W TRM44Q02648 567 aaKnown RBP0.89□□□□□ -2.27
SMC1YFL008W ARL3Q02804 198 aa0.89□□□□□ -2.27
SMC1YFL008W ABZ2Q03266 374 aa0.89□□□□□ -2.27
SMC1YFL008W AIM36Q03798 255 aa0.89□□□□□ -2.27
SMC1YFL008W BNA7Q04066 261 aa0.89□□□□□ -2.27
SMC1YFL008W YMR114CQ04471 368 aaKnown RBP0.89□□□□□ -2.27
SMC1YFL008W CDC123Q05791 360 aa0.89□□□□□ -2.27
SMC1YFL008W BUR2Q05949 395 aa0.89□□□□□ -2.27
SMC1YFL008W YLR177WQ06251 628 aa0.89□□□□□ -2.27
SMC1YFL008W HRT1Q08273 121 aa0.89□□□□□ -2.27
SMC1YFL008W PGC1Q08959 321 aa0.89□□□□□ -2.27
SMC1YFL008W AEP3Q12089 606 aa0.89□□□□□ -2.27
SMC1YFL008W PSY3Q12318 242 aa0.89□□□□□ -2.27
SMC1YFL008W ATP14Q12349 124 aa0.89□□□□□ -2.27
SMC1YFL008W YAL067W-AQ8TGK6 75 aa0.89□□□□□ -2.27
SMC1YFL008W SAS5Q99314 248 aa0.89□□□□□ -2.27
SMC1YFL008W CDC28P00546 298 aaKnown RBP0.89□□□□□ -2.27
SMC1YFL008W STF1P01098 86 aa0.89□□□□□ -2.27
SMC1YFL008W HIS3P06633 220 aa0.89□□□□□ -2.27
SMC1YFL008W DSF1P0CX08 502 aa0.89□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 85.7 ms