RNA–Protein interactions for RNA: YDR190C

RVB1, Transcript of ATP-dependent DNA helicase, also known as pontin, yeast

Gene RVB1, Length 1,392 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVB1	YDR190C	BUD25	P85052	153 aa		4.28	□□□□□ -1.72
RVB1	YDR190C	COX20	Q04935	205 aa		4.28	□□□□□ -1.72
RVB1	YDR190C	YLR283W	Q05867	314 aa		4.28	□□□□□ -1.72
RVB1	YDR190C	SNT309	Q06091	175 aa	Predicted RBP	4.28	□□□□□ -1.72
RVB1	YDR190C	HRT1	Q08273	121 aa		4.28	□□□□□ -1.72
RVB1	YDR190C	LEU9	Q12166	604 aa	Known RBP	4.28	□□□□□ -1.72
RVB1	YDR190C	INP53	Q12271	1107 aa		4.28	□□□□□ -1.72
RVB1	YDR190C	RDI1	Q12434	202 aa		4.28	□□□□□ -1.72
RVB1	YDR190C	YDR034W-B	Q6Q5X2	51 aa		4.28	□□□□□ -1.72
RVB1	YDR190C	AAC1	P04710	309 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	SEC12	P11655	471 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	BAR1	P12630	587 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YPK2	P18961	677 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	GPI12	P23797	304 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	PTP1	P25044	335 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	FUN19	P28003	413 aa	Predicted RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	ERG24	P32462	438 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	KRE6	P32486	720 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	CDC13	P32797	924 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	VPS17	P32913	551 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YOR062C	P36025	268 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	IFA38	P38286	347 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	TRR2	P38816	342 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	PFS1	P38872	237 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	VPS52	P39904	641 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	GET2	P40056	285 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	UTP25	P40498	721 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	ALK1	P43633	760 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	RPE1	P46969	238 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	JAC1	P53193	184 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	MTL1	P53214	551 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	FMP48	P53233	369 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YML108W	Q03759	105 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	GAS2	Q06135	555 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YPR091C	Q06833	770 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YOR365C	Q08844	703 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	FMP40	Q08968	688 aa	Predicted RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	TMS1	Q12116	473 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	TRP4	P07285	380 aa	Predicted RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	RPL20A	P0CX23	172 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	RPL20B	P0CX24	172 aa	Predicted RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	MRP1	P10662	321 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	NHP6B	P11633	99 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	CKS1	P20486	150 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	MXR2	P25566	168 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	CNE1	P27825	502 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	NAM9	P27929	486 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
RVB1	YDR190C	SFK1	P35735	353 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	SRY1	P36007	326 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	VPS51	P36116	164 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	MRPL3	P36516	390 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	CDS1	P38221	457 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	AIM3	P38266	947 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	WSC4	P38739	605 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	BAT1	P38891	393 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	ELO1	P39540	310 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	NOP16	P40007	231 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	PCL7	P40186	285 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YIL060W	P40519	144 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	PMT6	P42934	759 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	IDS2	P46958	469 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	LYS20	P48570	428 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	YGR042W	P53227	271 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	SLI1	P53304	468 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YGR250C	P53316	781 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	ASI3	P53983	676 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YMR130W	Q04223	302 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	VBA1	Q04301	562 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	SEC13	Q04491	297 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	KEI1	Q06346	221 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	AIM6	Q07716	390 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YOL073C	Q08232	322 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	IRC13	Q08630	104 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	RDR1	Q08904	546 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	FRE3	Q08905	711 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YPL272C	Q08984	517 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	LYS21	Q12122	440 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	YOR214C	Q12282	236 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YDR262W	Q12331	272 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	YRM1	Q12340	786 aa		4.27	□□□□□ -1.73
RVB1	YDR190C	MEX67	Q99257	599 aa	Known RBP	4.27	□□□□□ -1.73
RVB1	YDR190C	FAB1	P34756	2278 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	PRB1	P09232	635 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	DSF1	P0CX08	502 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	YNR073C	P0CX09	502 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	UTR1	P21373	530 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	GAS1	P22146	559 aa	Known RBP	4.26	□□□□□ -1.73
RVB1	YDR190C	DAL80	P26343	269 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	ITR1	P30605	584 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	ACB1	P31787	87 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	PDR3	P33200	976 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	TAF14	P35189	244 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	APL3	P38065	1025 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	GEP4	P38812	185 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	PRP39	P39682	629 aa	Known RBP	4.26	□□□□□ -1.73
RVB1	YDR190C	SER3	P40054	469 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	NAS2	P40555	220 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	ECM27	P47144	725 aa		4.26	□□□□□ -1.73
RVB1	YDR190C	VHT1	P53241	593 aa		4.26	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms