RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C TPS2P31688 896 aaKnown RBP3.11□□□□□ -1.91
SHU2YDR078C MSN4P33749 630 aa3.11□□□□□ -1.91
SHU2YDR078C ASP1P38986 381 aaPredicted RBP3.11□□□□□ -1.91
SHU2YDR078C SEN34P39707 275 aa3.11□□□□□ -1.91
SHU2YDR078C EDC2P40023 145 aaPredicted RBP3.11□□□□□ -1.91
SHU2YDR078C YIL012WP40551 113 aa3.11□□□□□ -1.91
SHU2YDR078C DSN1P40568 576 aa3.11□□□□□ -1.91
SHU2YDR078C YFL012WP43580 148 aa3.11□□□□□ -1.91
SHU2YDR078C COQ5P49017 307 aa3.11□□□□□ -1.91
SHU2YDR078C YGL118CP53132 145 aa3.11□□□□□ -1.91
SHU2YDR078C MRPL50P53724 139 aa3.11□□□□□ -1.91
SHU2YDR078C SWS2P53937 143 aa3.11□□□□□ -1.91
SHU2YDR078C ACT1P60010 375 aaKnown RBP3.11□□□□□ -1.91
SHU2YDR078C SDC1Q03323 175 aa3.11□□□□□ -1.91
SHU2YDR078C YLR283WQ05867 314 aa3.11□□□□□ -1.91
SHU2YDR078C CSM4Q08955 156 aa3.11□□□□□ -1.91
SHU2YDR078C AUS1Q08409 1394 aa3.11□□□□□ -1.91
SHU2YDR078C YMR316C-AI2HB70 103 aa3.1□□□□□ -1.91
SHU2YDR078C COX10P21592 462 aa3.1□□□□□ -1.91
SHU2YDR078C RNA15P25299 296 aaPredicted RBP3.1□□□□□ -1.91
SHU2YDR078C GCN20P43535 752 aaKnown RBP3.1□□□□□ -1.91
SHU2YDR078C YGR067CP53243 804 aa3.1□□□□□ -1.91
SHU2YDR078C YDL144CQ07589 356 aa3.1□□□□□ -1.91
SHU2YDR078C AI5_BETAQ9ZZX0 354 aa3.1□□□□□ -1.91
SHU2YDR078C CAM1P29547 415 aaKnown RBP3.09□□□□□ -1.91
SHU2YDR078C QRI5P32344 111 aa3.09□□□□□ -1.91
SHU2YDR078C FRT2P39734 528 aa3.09□□□□□ -1.91
SHU2YDR078C YER184CP39961 794 aa3.09□□□□□ -1.91
SHU2YDR078C RTR1P40084 226 aaPredicted RBP3.09□□□□□ -1.91
SHU2YDR078C GLG2P47011 380 aa3.09□□□□□ -1.91
SHU2YDR078C MRS2Q01926 470 aa3.09□□□□□ -1.91
SHU2YDR078C EBS1Q03466 884 aaKnown RBP3.09□□□□□ -1.91
SHU2YDR078C YDR209CQ03480 137 aa3.09□□□□□ -1.91
SHU2YDR078C KRE28Q04431 385 aa3.09□□□□□ -1.91
SHU2YDR078C TDH2P00358 332 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C RPL4AP10664 362 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C CKA2P19454 339 aa3.08□□□□□ -1.92
SHU2YDR078C RPS5P26783 225 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C NTG1P31378 399 aa3.08□□□□□ -1.92
SHU2YDR078C KRE6P32486 720 aa3.08□□□□□ -1.92
SHU2YDR078C SRB4P32569 687 aa3.08□□□□□ -1.92
SHU2YDR078C CAT2P32796 670 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C BMH2P34730 273 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C MID2P36027 376 aa3.08□□□□□ -1.92
SHU2YDR078C POP8P38208 133 aa3.08□□□□□ -1.92
SHU2YDR078C MED8P38304 223 aa3.08□□□□□ -1.92
SHU2YDR078C BDH1P39714 382 aa3.08□□□□□ -1.92
SHU2YDR078C SMB1P40018 196 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C AVT6P40074 448 aa3.08□□□□□ -1.92
SHU2YDR078C RPL4BP49626 362 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C HSH155P49955 971 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C CAX4P53223 239 aa3.08□□□□□ -1.92
SHU2YDR078C FMP41P53889 259 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C MYO5Q04439 1219 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C RLP24Q07915 199 aaKnown RBP3.08□□□□□ -1.92
SHU2YDR078C PHO80P20052 293 aa3.07□□□□□ -1.92
SHU2YDR078C OSM1P21375 501 aaKnown RBP3.07□□□□□ -1.92
SHU2YDR078C VPS3P23643 1011 aa3.07□□□□□ -1.92
SHU2YDR078C HOM6P31116 359 aaKnown RBP3.07□□□□□ -1.92
SHU2YDR078C HEK2P38199 381 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92 RIP-Chip
SHU2YDR078C LDB7P38210 180 aa3.07□□□□□ -1.92
SHU2YDR078C TCD1P38756 429 aa3.07□□□□□ -1.92
SHU2YDR078C BFR1P38934 470 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
SHU2YDR078C UFD1P53044 361 aa3.07□□□□□ -1.92
SHU2YDR078C SMD1Q02260 146 aaPredicted RBP3.07□□□□□ -1.92
SHU2YDR078C CWC21Q03375 135 aaKnown RBP3.07□□□□□ -1.92
SHU2YDR078C MRX8Q05473 314 aa3.07□□□□□ -1.92
SHU2YDR078C SNF8Q12483 233 aa3.07□□□□□ -1.92
SHU2YDR078C YPL119C-AQ3E751 87 aa3.07□□□□□ -1.92
SHU2YDR078C MATALPHA1P0CY06 175 aa3.06□□□□□ -1.92
SHU2YDR078C HMLALPHA1P0CY07 175 aa3.06□□□□□ -1.92
SHU2YDR078C TCP1P12612 559 aaKnown RBP3.06□□□□□ -1.92
SHU2YDR078C FUS3P16892 353 aaKnown RBP3.06□□□□□ -1.92
SHU2YDR078C YHL044WP38727 235 aa3.06□□□□□ -1.92
SHU2YDR078C MSS2P40990 351 aa3.06□□□□□ -1.92
SHU2YDR078C OTU1P43558 301 aa3.06□□□□□ -1.92
SHU2YDR078C HOC1P47124 396 aa3.06□□□□□ -1.92
SHU2YDR078C YNL095CP53932 642 aa3.06□□□□□ -1.92
SHU2YDR078C ASI3P53983 676 aa3.06□□□□□ -1.92
SHU2YDR078C ECM11Q04110 302 aa3.06□□□□□ -1.92
SHU2YDR078C YDL211CQ12121 372 aa3.06□□□□□ -1.92
SHU2YDR078C RPO26P20435 155 aa3.05□□□□□ -1.92
SHU2YDR078C ERG2P32352 222 aa3.05□□□□□ -1.92
SHU2YDR078C JEN1P36035 616 aa3.05□□□□□ -1.92
SHU2YDR078C YHL049CP38722 271 aa3.05□□□□□ -1.92
SHU2YDR078C SYS1P41544 203 aa3.05□□□□□ -1.92
SHU2YDR078C FLC3P53121 802 aa3.05□□□□□ -1.92
SHU2YDR078C USE1P53146 245 aa3.05□□□□□ -1.92
SHU2YDR078C NOP13P53883 403 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
SHU2YDR078C POX1P13711 748 aa3.04□□□□□ -1.92
SHU2YDR078C CPT1P17898 393 aa3.04□□□□□ -1.92
SHU2YDR078C EHD3P28817 500 aa3.04□□□□□ -1.92
SHU2YDR078C HMT1P38074 348 aa3.04□□□□□ -1.92
SHU2YDR078C PHO89P38361 574 aa3.04□□□□□ -1.92
SHU2YDR078C YHI9P38765 294 aa3.04□□□□□ -1.92
SHU2YDR078C TRR2P38816 342 aa3.04□□□□□ -1.92
SHU2YDR078C JHD2P47156 728 aaPredicted RBP3.04□□□□□ -1.92
SHU2YDR078C SWT21P53873 357 aaPredicted RBP3.04□□□□□ -1.92
SHU2YDR078C SPO77Q06134 477 aa3.04□□□□□ -1.92
SHU2YDR078C DXO1Q06349 442 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms