RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 UFD1P53044 361 aa6.1□□□□□ -1.43
NME1NME1 IES4Q08561 116 aa6.1□□□□□ -1.43
NME1NME1 STH1P32597 1359 aa6.09□□□□□ -1.43
NME1NME1 POP8P38208 133 aa6.09□□□□□ -1.43
NME1NME1 BIG1P38813 335 aa6.09□□□□□ -1.43
NME1NME1 SER33P40510 469 aa6.09□□□□□ -1.43
NME1NME1 RPL10P41805 221 aaKnown RBP6.09□□□□□ -1.43
NME1NME1 NNT1Q05874 261 aa6.09□□□□□ -1.43
NME1NME1 PHO89P38361 574 aa6.08□□□□□ -1.44
NME1NME1 PRS2P38620 318 aaKnown RBP6.08□□□□□ -1.44
NME1NME1 DED81P38707 554 aaKnown RBP6.08□□□□□ -1.44
NME1NME1 NUP84P52891 726 aa6.08□□□□□ -1.44
NME1NME1 SDC1Q03323 175 aa6.08□□□□□ -1.44
NME1NME1 SDO1Q07953 250 aaKnown RBP6.08□□□□□ -1.44
NME1NME1 YDL012CQ12489 107 aa6.08□□□□□ -1.44
NME1NME1 PRS4P38063 326 aaPredicted RBP6.07□□□□□ -1.44
NME1NME1 YHL044WP38727 235 aa6.07□□□□□ -1.44
NME1NME1 YHR045WP38775 560 aa6.07□□□□□ -1.44
NME1NME1 SYS1P41544 203 aa6.07□□□□□ -1.44
NME1NME1 MAL13P53338 473 aa6.07□□□□□ -1.44
NME1NME1 SWT21P53873 357 aaPredicted RBP6.07□□□□□ -1.44
NME1NME1 YPL264CQ08980 353 aa6.07□□□□□ -1.44
NME1NME1 ZRG17P53735 605 aa6.06□□□□□ -1.44
NME1NME1 LOA1Q06508 300 aa6.06□□□□□ -1.44
NME1NME1 RPL4AP10664 362 aaKnown RBP6.05□□□□□ -1.44
NME1NME1 CDC42P19073 191 aa6.05□□□□□ -1.44
NME1NME1 LIA1P47120 325 aaKnown RBP6.05□□□□□ -1.44
NME1NME1 RPL4BP49626 362 aaKnown RBP6.05□□□□□ -1.44
NME1NME1 NBP1P52919 319 aaPredicted RBP6.05□□□□□ -1.44
NME1NME1 FMP41P53889 259 aaKnown RBP6.05□□□□□ -1.44
NME1NME1 SWS2P53937 143 aa6.05□□□□□ -1.44
NME1NME1 YDR209CQ03480 137 aa6.05□□□□□ -1.44
NME1NME1 AI5_BETAQ9ZZX0 354 aa6.05□□□□□ -1.44
NME1NME1 ERG2P32352 222 aa6.04□□□□□ -1.44
NME1NME1 RPE1P46969 238 aa6.04□□□□□ -1.44
NME1NME1 NBP35P52920 328 aa6.04□□□□□ -1.44
NME1NME1 IES3Q12345 250 aa6.04□□□□□ -1.44
NME1NME1 PRE7P23724 241 aaKnown RBP6.03□□□□□ -1.44
NME1NME1 ARO4P32449 370 aaKnown RBP6.03□□□□□ -1.44
NME1NME1 SKI2P35207 1287 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
NME1NME1 SRL4Q03085 281 aa6.03□□□□□ -1.44
NME1NME1 TY3A-GQ12173 290 aa6.03□□□□□ -1.44
NME1NME1 YOR029WQ12243 111 aa6.03□□□□□ -1.44
NME1NME1 TY3A-IQ99219 290 aa6.03□□□□□ -1.44
NME1NME1 MED8P38304 223 aa6.02□□□□□ -1.45
NME1NME1 YHI9P38765 294 aa6.02□□□□□ -1.45
NME1NME1 DSN1P40568 576 aa6.02□□□□□ -1.45
NME1NME1 OSH6Q02201 448 aa6.02□□□□□ -1.45
NME1NME1 EBS1Q03466 884 aaKnown RBP6.02□□□□□ -1.45
NME1NME1 YAK1P14680 807 aa6.01□□□□□ -1.45
NME1NME1 AST1P35183 429 aa6.01□□□□□ -1.45
NME1NME1 HEK2P38199 381 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
NME1NME1 FMC1P40491 155 aa6.01□□□□□ -1.45
NME1NME1 MRPL50P53724 139 aa6.01□□□□□ -1.45
NME1NME1 YNL095CP53932 642 aa6.01□□□□□ -1.45
NME1NME1 PET117Q02771 107 aa6.01□□□□□ -1.45
NME1NME1 SGT2Q12118 346 aaKnown RBP6.01□□□□□ -1.45
NME1NME1 QRI5P32344 111 aa6□□□□□ -1.45
NME1NME1 MRX3P38172 270 aa6□□□□□ -1.45
NME1NME1 SLX1P38324 304 aa6□□□□□ -1.45
NME1NME1 COS4P43542 379 aa6□□□□□ -1.45
NME1NME1 AGX1P43567 385 aa6□□□□□ -1.45
NME1NME1 RSM27P53305 110 aa6□□□□□ -1.45
NME1NME1 PEX10Q05568 337 aa6□□□□□ -1.45
NME1NME1 PAM18Q07914 168 aa6□□□□□ -1.45
NME1NME1 YPL150WQ12152 901 aa6□□□□□ -1.45
NME1NME1 ATG31Q12421 196 aa6□□□□□ -1.45
NME1NME1 VPS3P23643 1011 aa5.99□□□□□ -1.45
NME1NME1 YBL081WP38180 368 aaKnown RBP5.99□□□□□ -1.45
NME1NME1 YIL059CP40520 121 aa5.99□□□□□ -1.45
NME1NME1 TVP15Q03860 143 aa5.99□□□□□ -1.45
NME1NME1 ATG5Q12380 294 aa5.99□□□□□ -1.45
NME1NME1 YPL119C-AQ3E751 87 aa5.99□□□□□ -1.45
NME1NME1 RNA15P25299 296 aaPredicted RBP5.98□□□□□ -1.45
NME1NME1 SLX9P53251 210 aaPredicted RBP5.98□□□□□ -1.45
NME1NME1 YDR222WQ04925 415 aa5.98□□□□□ -1.45
NME1NME1 MSH5Q12175 901 aa5.98□□□□□ -1.45
NME1NME1 FMT1P32785 401 aa5.97□□□□□ -1.45
NME1NME1 HMT1P38074 348 aa5.97□□□□□ -1.45
NME1NME1 YFR045WP43617 309 aa5.97□□□□□ -1.45
NME1NME1 BOP2Q06150 570 aa5.97□□□□□ -1.45
NME1NME1 CCH1P50077 2039 aa5.97□□□□□ -1.45
NME1NME1 YOL163WP0CF20 169 aa5.96□□□□□ -1.46
NME1NME1 YPR063CQ12160 140 aa5.96□□□□□ -1.46
NME1NME1 YHL049CP38722 271 aa5.95□□□□□ -1.46
NME1NME1 ECO1P43605 281 aa5.95□□□□□ -1.46
NME1NME1 ASI3P53983 676 aa5.95□□□□□ -1.46
NME1NME1 DXO1Q06349 442 aa5.95□□□□□ -1.46
NME1NME1 CSM4Q08955 156 aa5.95□□□□□ -1.46
NME1NME1 SNF8Q12483 233 aa5.95□□□□□ -1.46
NME1NME1 PRY2P36110 329 aa5.94□□□□□ -1.46
NME1NME1 TRM7P38238 310 aaKnown RBP5.94□□□□□ -1.46
NME1NME1 SMB1P40018 196 aaKnown RBP5.94□□□□□ -1.46
NME1NME1 POX1P13711 748 aa5.93□□□□□ -1.46
NME1NME1 YCR016WP25617 290 aaKnown RBP5.93□□□□□ -1.46
NME1NME1 CSG2P35206 410 aa5.93□□□□□ -1.46
NME1NME1 PFS2P42841 465 aaKnown RBP5.93□□□□□ -1.46
NME1NME1 HSH155P49955 971 aaKnown RBP5.93□□□□□ -1.46
NME1NME1 GTO3Q04806 366 aa5.93□□□□□ -1.46
NME1NME1 PRR2Q12310 699 aa5.93□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms