RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 ADGRB1O14514 1584 aa13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 SMAD1Q15797 465 aaKnown RBP13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 SNRNP35Q16560 246 aaKnown RBP13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 TRIM72Q6ZMU5 477 aa13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 BAG5Q9UL15 447 aa13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 LRRIQ1Q96JM4 1722 aa13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 PI4K2BG5E9Z4 385 aa13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 SLC16A3O15427 465 aaKnown RBP13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 SLC37A4O43826 429 aa13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 CYP2C19P33261 490 aa13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 CASP2P42575 452 aa13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 GCOM2Q9BZD3 368 aaPredicted RBP13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 DHX35Q9H5Z1 703 aaKnown RBP13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 SMARCAL1Q9NZC9 954 aa13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 REREQ9P2R6 1566 aa13.29□□□□□ -0.28
TNFAIP3-206ENST00000612899 KRT38O76015 456 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 KRT14P02533 472 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 S100BP04271 92 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 CDH6P55285 790 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 ZC3H18Q86VM9 953 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 VPS39Q96JC1 886 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 TXLNGQ9NUQ3 528 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 POLLQ9UGP5 575 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 TFR2Q9UP52 801 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 FAM187AA6NFU0 413 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 POLRMTO00411 1230 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 FGFR2P21802 821 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 FXR2P51116 673 aaKnown RBP eCLIP13.28□□□□□ -0.283e-6■□□□□ 10.5
TNFAIP3-206ENST00000612899 SAMD7Q7Z3H4 446 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 CATSPER3Q86XQ3 398 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 SLC35G2Q8TBE7 412 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 UBN1Q9NPG3 1134 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 STAP1Q9ULZ2 295 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 ZC3H13Q5T200 1668 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 MEGF6O75095 1541 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 CFLARO15519 480 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 RTN2O75298 545 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 KPNA2P52292 529 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 CAV1Q03135 178 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 PDIA2Q13087 525 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 SRLQ86TD4 932 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 ZBED8Q8IZ13 594 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 SEPT1Q8WYJ6 367 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 LRGUKQ96M69 825 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 KLHL11Q9NVR0 708 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 GGA3Q9NZ52 723 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 SUCLA2Q9P2R7 463 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 LRRC14Q15048 493 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 EPM2AIP1Q7L775 607 aaPredicted RBP13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 RBM46Q8TBY0 533 aaKnown RBP13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 CPA5Q8WXQ8 436 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 EXT2Q93063 718 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 KCNH7Q9NS40 1196 aa13.28□□□□□ -0.28
TNFAIP3-206ENST00000612899 NRXN1Q9ULB1 1477 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 SPATA31A6Q5VVP1 1343 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 ASB14A6NK59 587 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 PIK3R2O00459 728 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 KRT3P12035 628 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 BEND6Q5SZJ8 279 aaPredicted RBP13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 ATG16L1Q676U5 607 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 THEM5Q8N1Q8 247 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 ACER1Q8TDN7 264 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 MORC4Q8TE76 937 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 ATG4CQ96DT6 458 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 DEFB129Q9H1M3 183 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 KIDINS220Q9ULH0 1771 aa13.27□□□□□ -0.28
TNFAIP3-206ENST00000612899 MAPK13O15264 365 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 PPP2R2AP63151 447 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 TMTC4Q5T4D3 741 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 IZUMO3Q5VZ72 239 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 FASTKD5Q7L8L6 764 aaKnown RBP13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 ADGRA1Q86SQ6 560 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 GOLPH3Q9H4A6 298 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 PARVAQ9NVD7 372 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 INTUQ9ULD6 942 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 FRMD3A2A2Y4 597 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 RPS6P62753 249 aaKnown RBP13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 MKRN4PQ13434 485 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 HEATR6Q6AI08 1181 aaKnown RBP13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 SIK2Q9H0K1 926 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 VPS11Q9H270 941 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 ACTR5Q9H9F9 607 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 PPARGC1AQ9UBK2 798 aaKnown RBP13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 AGAP1Q9UPQ3 857 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 KDM6AO15550 1401 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 MYBL1P10243 752 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 NME3Q13232 169 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 PRMT6Q96LA8 375 aaPredicted RBP13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 RIT2Q99578 217 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 TRIM55Q9BYV6 548 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 MID2Q9UJV3 735 aa13.27□□□□□ -0.29
TNFAIP3-206ENST00000612899 AGLP35573 1532 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 C19orf81C9J6K1 198 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 TTI1O43156 1089 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 TSPY1Q01534 308 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms