RNA–Protein interactions for RNA: ENST00000611412.4

VPS45-212, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 5 BASIC

Gene VPS45, Length 2,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-212ENST00000611412 ITGB8P26012 769 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 RPL13P26373 211 aaKnown RBP13.02□□□□□ -0.33
VPS45-212ENST00000611412 TNFSF9P41273 254 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 TPM4P67936 248 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 RBL2Q08999 1139 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 KCNJ12Q14500 433 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.33
VPS45-212ENST00000611412 CCDC40Q4G0X9 1142 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 CDKAL1Q5VV42 579 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 DEFB128Q7Z7B8 93 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 ZC3H3Q8IXZ2 948 aaKnown RBP13.02□□□□□ -0.33
VPS45-212ENST00000611412 TMEM192Q8IY95 271 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 THAP9Q9H5L6 903 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 STYXL1Q9Y6J8 313 aa13.02□□□□□ -0.33
VPS45-212ENST00000611412 PITPNM1O00562 1244 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 GPR182O15218 404 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 MGEA5O60502 916 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 ADRB2P07550 413 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 ZNF18P17022 549 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 MCL1Q07820 350 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 SLFN12LQ6IEE8 588 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 NOTUMQ6P988 496 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 C12orf56Q8IXR9 622 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 FAM186BQ8IYM0 893 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 TMX1Q9H3N1 280 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 TAB2Q9NYJ8 693 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 CGNQ9P2M7 1197 aaKnown RBP13.01□□□□□ -0.33
VPS45-212ENST00000611412 HES2Q9Y543 173 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 SCN5AQ14524 2016 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 N4BP3O15049 544 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 MTIF2P46199 727 aaKnown RBP13.01□□□□□ -0.33
VPS45-212ENST00000611412 SNRPFP62306 86 aaKnown RBP13.01□□□□□ -0.33
VPS45-212ENST00000611412 NFIL3Q16649 462 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 PTPN21Q16825 1174 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 TCTN1Q2MV58 587 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 TCP11X2Q5H9J9 407 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 TWF2Q6IBS0 349 aaKnown RBP13.01□□□□□ -0.33
VPS45-212ENST00000611412 FILIP1Q7Z7B0 1213 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 SLC9A9Q8IVB4 645 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 C7orf61Q8IZ16 206 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 TNS4Q8IZW8 715 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 GPD1LQ8N335 351 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 FAM84AQ96KN4 292 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 APOL6Q9BWW8 343 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 IFIH1Q9BYX4 1025 aaKnown RBP13.01□□□□□ -0.33
VPS45-212ENST00000611412 MAGEC2Q9UBF1 373 aaPredicted RBP13.01□□□□□ -0.33
VPS45-212ENST00000611412 FRMD4BQ9Y2L6 1034 aa13.01□□□□□ -0.33
VPS45-212ENST00000611412 ALPK3Q96L96 1907 aa13□□□□□ -0.33
VPS45-212ENST00000611412 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
VPS45-212ENST00000611412 EPB41P11171 864 aaKnown RBP13□□□□□ -0.33
VPS45-212ENST00000611412 PSMC2P35998 433 aaKnown RBP13□□□□□ -0.33
VPS45-212ENST00000611412 SNRNP35Q16560 246 aaKnown RBP13□□□□□ -0.33
VPS45-212ENST00000611412 UBXN11Q5T124 520 aa13□□□□□ -0.33
VPS45-212ENST00000611412 SLC27A1Q6PCB7 646 aa13□□□□□ -0.33
VPS45-212ENST00000611412 FOXR2Q6PJQ5 311 aa13□□□□□ -0.33
VPS45-212ENST00000611412 CRELD2Q6UXH1 353 aaPredicted RBP13□□□□□ -0.33
VPS45-212ENST00000611412 FAM212AQ96EL1 285 aa13□□□□□ -0.33
VPS45-212ENST00000611412 ADPGKQ9BRR6 497 aa13□□□□□ -0.33
VPS45-212ENST00000611412 VPS16Q9H269 839 aa13□□□□□ -0.33
VPS45-212ENST00000611412 OGTO15294 1046 aa13□□□□□ -0.33
VPS45-212ENST00000611412 EXTL3O43909 919 aa13□□□□□ -0.33
VPS45-212ENST00000611412 FAM189A1O60320 539 aa13□□□□□ -0.33
VPS45-212ENST00000611412 RAG1P15918 1043 aa13□□□□□ -0.33
VPS45-212ENST00000611412 AXLP30530 894 aa13□□□□□ -0.33
VPS45-212ENST00000611412 WNT7BP56706 349 aa13□□□□□ -0.33
VPS45-212ENST00000611412 FANCCQ00597 558 aa13□□□□□ -0.33
VPS45-212ENST00000611412 KRT31Q15323 416 aa13□□□□□ -0.33
VPS45-212ENST00000611412 PCBP1Q15365 356 aaKnown RBP eCLIP13□□□□□ -0.33
VPS45-212ENST00000611412 DCAF17Q5H9S7 520 aaPredicted RBP13□□□□□ -0.33
VPS45-212ENST00000611412 DBF4BQ8NFT6 615 aa13□□□□□ -0.33
VPS45-212ENST00000611412 TRIM6Q9C030 488 aaPredicted RBP13□□□□□ -0.33
VPS45-212ENST00000611412 NXF3Q9H4D5 531 aaKnown RBP13□□□□□ -0.33
VPS45-212ENST00000611412 MMRN2Q9H8L6 949 aa13□□□□□ -0.33
VPS45-212ENST00000611412 RNF19AQ9NV58 838 aa13□□□□□ -0.33
VPS45-212ENST00000611412 SNTG2Q9NY99 539 aa13□□□□□ -0.33
VPS45-212ENST00000611412 PES1O00541 588 aaKnown RBP12.99□□□□□ -0.33
VPS45-212ENST00000611412 SERPINC1P01008 464 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 TRIM49P0CI25 452 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 TRIM49CP0CI26 452 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 STAG3L1P0CL83 205 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 MCF2P10911 925 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 PRKCSHP14314 528 aaPredicted RBP12.99□□□□□ -0.33
VPS45-212ENST00000611412 ZSCAN20P17040 1043 aaPredicted RBP12.99□□□□□ -0.33
VPS45-212ENST00000611412 DLG4P78352 724 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 TCERG1LQ5VWI1 586 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 FAM114A1Q8IWE2 563 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 PLEKHO2Q8TD55 490 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 CCDC127Q96BQ5 260 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 POP1Q99575 1024 aaKnown RBP12.99□□□□□ -0.33
VPS45-212ENST00000611412 ADAM2Q99965 735 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 ARMCX3Q9UH62 379 aaPredicted RBP12.99□□□□□ -0.33
VPS45-212ENST00000611412 TANC1Q9C0D5 1861 aa12.99□□□□□ -0.33
VPS45-212ENST00000611412 ZNF233A6NK53 670 aa12.98□□□□□ -0.33
VPS45-212ENST00000611412 SLC16A3O15427 465 aaKnown RBP12.98□□□□□ -0.33
VPS45-212ENST00000611412 TIMP1P01033 207 aa12.98□□□□□ -0.33
VPS45-212ENST00000611412 SYN1P17600 705 aa12.98□□□□□ -0.33
VPS45-212ENST00000611412 AKAP5P24588 427 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms