RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 HVCN1Q96D96 273 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 UBE2ZQ9H832 354 aaPredicted RBP20.69■□□□□ 0.9
CCDC9-205ENST00000600117 SLC39A2Q9NP94 309 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 CHST12Q9NRB3 414 aa20.69■□□□□ 0.9
CCDC9-205ENST00000600117 PIN4Q9Y237 131 aaKnown RBP20.69■□□□□ 0.9
CCDC9-205ENST00000600117 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.68■□□□□ 0.9
CCDC9-205ENST00000600117 LCHNA4D1U4 455 aa20.68■□□□□ 0.9
CCDC9-205ENST00000600117 AXLP30530 894 aa20.68■□□□□ 0.9
CCDC9-205ENST00000600117 KCNA1Q09470 495 aa20.68■□□□□ 0.9
CCDC9-205ENST00000600117 PRPF4BQ13523 1007 aaKnown RBP20.68■□□□□ 0.9
CCDC9-205ENST00000600117 ALCAMQ13740 583 aa20.68■□□□□ 0.9
CCDC9-205ENST00000600117 CCDC47Q96A33 483 aaKnown RBP20.68■□□□□ 0.9
CCDC9-205ENST00000600117 CPB2Q96IY4 423 aa20.68■□□□□ 0.9
CCDC9-205ENST00000600117 TARS2Q9BW92 718 aaKnown RBP20.68■□□□□ 0.9
CCDC9-205ENST00000600117 FTHL17Q9BXU8 183 aa20.68■□□□□ 0.9
CCDC9-205ENST00000600117 KIAA1468Q9P260 1216 aa20.68■□□□□ 0.9
CCDC9-205ENST00000600117 MAN1B1Q9UKM7 699 aa20.68■□□□□ 0.9
CCDC9-205ENST00000600117 ABHD14A-ACY1A0A1B0GW23 586 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.67■□□□□ 0.9
CCDC9-205ENST00000600117 ENPP3O14638 875 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 EIF3DO15371 548 aaKnown RBP eCLIP20.67■□□□□ 0.9
CCDC9-205ENST00000600117 PRPF6O94906 941 aaKnown RBP20.67■□□□□ 0.9
CCDC9-205ENST00000600117 PIGRP01833 764 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 ALADP13716 330 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 ABCD1P33897 745 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 HOXD13P35453 343 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 MRE11P49959 708 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 STRN3Q13033 797 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 IKBKEQ14164 716 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 NFKBIBQ15653 356 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 LEXMQ3ZCV2 418 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 UBXN11Q5T124 520 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 L1TD1Q5T7N2 865 aaKnown RBP20.67■□□□□ 0.9
CCDC9-205ENST00000600117 ACO2Q99798 780 aaKnown RBP20.67■□□□□ 0.9
CCDC9-205ENST00000600117 ADAM2Q99965 735 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 MRPL4Q9BYD3 311 aaKnown RBP20.67■□□□□ 0.9
CCDC9-205ENST00000600117 GDAQ9Y2T3 454 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 PCDHB13Q9Y5F0 798 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 C5orf42Q9H799 3197 aa20.67■□□□□ 0.9
CCDC9-205ENST00000600117 ZNF318Q5VUA4 2279 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 A0A1B0GUA9 196 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 WDR5P61964 334 aaKnown RBP20.66■□□□□ 0.9
CCDC9-205ENST00000600117 BMT2Q1RMZ1 405 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 EEF1DP3Q658K8 133 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 NOTUMQ6P988 496 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 ZNF507Q8TCN5 953 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 SCFD1Q8WVM8 642 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 ZBED2Q9BTP6 218 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 TRAIPQ9BWF2 469 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 IKZF4Q9H2S9 585 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 PDZD7Q9H5P4 517 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 RGS18Q9NS28 235 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 RMND1Q9NWS8 449 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 TMEM63CQ9P1W3 806 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 TNFSF13BQ9Y275 285 aa20.66■□□□□ 0.9
CCDC9-205ENST00000600117 ZMYM2Q9UBW7 1377 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 UBE4BO95155 1302 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 C9IYK1 514 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 ABLIM1O14639 778 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 KLHL40Q2TBA0 621 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 ATF7IP2Q5U623 682 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 SLC39A4Q6P5W5 647 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 ZPBP2Q6X784 338 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 RBM43Q6ZSC3 357 aaKnown RBP20.65■□□□□ 0.9
CCDC9-205ENST00000600117 STXBP4Q6ZWJ1 553 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 CDR2LQ86X02 465 aaPredicted RBP20.65■□□□□ 0.9
CCDC9-205ENST00000600117 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.65■□□□□ 0.9
CCDC9-205ENST00000600117 CCDC51Q96ER9 411 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 ACCSQ96QU6 501 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 PTPRHQ9HD43 1115 aa20.65■□□□□ 0.9
CCDC9-205ENST00000600117 N4BP3O15049 544 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 EFCAB14O75071 495 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 ZSCAN20P17040 1043 aaPredicted RBP20.64■□□□□ 0.89
CCDC9-205ENST00000600117 BMP6P22004 513 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 PROZP22891 400 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 SSTR3P32745 418 aaPredicted RBP20.64■□□□□ 0.89
CCDC9-205ENST00000600117 ERVK-21P61565 698 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 NCBP1Q09161 790 aaKnown RBP20.64■□□□□ 0.89
CCDC9-205ENST00000600117 MORC3Q14149 939 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 CCDC183Q5T5S1 534 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 ZNF658Q5TYW1 1059 aaPredicted RBP20.64■□□□□ 0.89
CCDC9-205ENST00000600117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.64■□□□□ 0.89
CCDC9-205ENST00000600117 SMYD4Q8IYR2 804 aaPredicted RBP20.64■□□□□ 0.89
CCDC9-205ENST00000600117 RAD9AQ99638 391 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 EIF2AQ9BY44 585 aaKnown RBP20.64■□□□□ 0.89
CCDC9-205ENST00000600117 KCNH6Q9H252 994 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 C1orf112Q9NSG2 853 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 USP34Q70CQ2 3546 aa20.64■□□□□ 0.89
CCDC9-205ENST00000600117 TTC3P53804 2025 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 ANKRD63C9JTQ0 380 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 BIN1O00499 593 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 KCNA5P22460 613 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 FAM189BP81408 668 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 DEFB103AP81534 67 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 NHLH1Q02575 133 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 ISM2Q6H9L7 571 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 TWF2Q6IBS0 349 aaKnown RBP20.63■□□□□ 0.89
CCDC9-205ENST00000600117 SLC24A5Q71RS6 500 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 CRIPAKQ8N1N5 446 aa20.63■□□□□ 0.89
CCDC9-205ENST00000600117 ZBTB45Q96K62 511 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms