RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 FBXO18Q8NFZ0 1043 aa16.79■□□□□ 0.28
TGFB1-202ENST00000597453 BSNDQ8WZ55 320 aa16.79■□□□□ 0.28
TGFB1-202ENST00000597453 NACC1Q96RE7 527 aa16.79■□□□□ 0.28
TGFB1-202ENST00000597453 POLR3CQ9BUI4 534 aaPredicted RBP16.79■□□□□ 0.28
TGFB1-202ENST00000597453 EMILIN2Q9BXX0 1053 aa16.79■□□□□ 0.28
TGFB1-202ENST00000597453 FOXP1Q9H334 677 aaPredicted RBP16.79■□□□□ 0.28
TGFB1-202ENST00000597453 SMOC2Q9H3U7 446 aa16.79■□□□□ 0.28
TGFB1-202ENST00000597453 MRPL17Q9NRX2 175 aaKnown RBP16.79■□□□□ 0.28
TGFB1-202ENST00000597453 STK39Q9UEW8 545 aa16.79■□□□□ 0.28
TGFB1-202ENST00000597453 GIT1Q9Y2X7 761 aa16.79■□□□□ 0.28
TGFB1-202ENST00000597453 TTLL13PA6NNM8 815 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 URODP06132 367 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 ORC2Q13416 577 aaPredicted RBP16.78■□□□□ 0.28
TGFB1-202ENST00000597453 NBR1Q14596 966 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 TTC38Q5R3I4 469 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 CDCA2Q69YH5 1023 aaPredicted RBP16.78■□□□□ 0.28
TGFB1-202ENST00000597453 PPP4R3CPQ6ZMV5 832 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 ALYREFQ86V81 257 aaKnown RBP16.78■□□□□ 0.28
TGFB1-202ENST00000597453 SUGP1Q8IWZ8 645 aaKnown RBP16.78■□□□□ 0.28
TGFB1-202ENST00000597453 FBXL6Q8N531 539 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 KREMEN2Q8NCW0 462 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 MCPH1Q8NEM0 835 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 PRSS33Q8NF86 280 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 RPS6KC1Q96S38 1066 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 SFXN1Q9H9B4 322 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 KLK14Q9P0G3 267 aa16.78■□□□□ 0.28
TGFB1-202ENST00000597453 MTCL1Q9Y4B5 1905 aaKnown RBP16.78■□□□□ 0.28
TGFB1-202ENST00000597453 CACNA1HO95180 2353 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 PDGFBP01127 241 aaPredicted RBP16.77■□□□□ 0.28
TGFB1-202ENST00000597453 ASGR2P07307 311 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 RPA1P27694 616 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 VCPP55072 806 aaKnown RBP16.77■□□□□ 0.28
TGFB1-202ENST00000597453 ECM1Q16610 540 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 KIAA0319Q5VV43 1072 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 PADI6Q6TGC4 694 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 GPR149Q86SP6 731 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 NOSTRINQ8IVI9 506 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 HACE1Q8IYU2 909 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 TDRD5Q8NAT2 981 aaKnown RBP16.77■□□□□ 0.28
TGFB1-202ENST00000597453 RABGGTAQ92696 567 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 B3GALT6Q96L58 329 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 FZD8Q9H461 694 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 PRMT7Q9NVM4 692 aaPredicted RBP16.77■□□□□ 0.28
TGFB1-202ENST00000597453 USP20Q9Y2K6 914 aa16.77■□□□□ 0.28
TGFB1-202ENST00000597453 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.77■□□□□ 0.28
TGFB1-202ENST00000597453 SPDYE4A6NLX3 237 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 TEX28O15482 410 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 BRD1O95696 1058 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 EDN1P05305 212 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 GLUD2P49448 558 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 CUL4AQ13619 759 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 C4orf32Q8N8J7 132 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 ERMNQ8TAM6 284 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 PRIMPOLQ96LW4 560 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 MAN1C1Q9NR34 630 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 CACNG4Q9UBN1 327 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 PARP2Q9UGN5 583 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 SORCS3Q9UPU3 1222 aa16.76■□□□□ 0.27
TGFB1-202ENST00000597453 TRIP11Q15643 1979 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 ARHGEF35A5YM69 484 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 MYBP10242 640 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 CYP11B2P19099 503 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 DSG1Q02413 1049 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 GRIK3Q13003 919 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 MTMR3Q13615 1198 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 GNL2Q13823 731 aaKnown RBP16.75■□□□□ 0.27
TGFB1-202ENST00000597453 FAM187BQ17R55 369 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 FUT10Q6P4F1 479 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 ZBTB8OSQ8IWT0 167 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 ZDHHC14Q8IZN3 488 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 PAAF1Q9BRP4 392 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 COLEC11Q9BWP8 271 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 GPR62Q9BZJ7 368 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 CCDC113Q9H0I3 377 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 CXCL16Q9H2A7 254 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 PDZD7Q9H5P4 517 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 RXFP1Q9HBX9 757 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 POLD4Q9HCU8 107 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 CHST7Q9NS84 486 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 LIMD1Q9UGP4 676 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 USTQ9Y2C2 406 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 ZMYM2Q9UBW7 1377 aa16.75■□□□□ 0.27
TGFB1-202ENST00000597453 NR1I2O75469 434 aa16.74■□□□□ 0.27
TGFB1-202ENST00000597453 ADH1AP07327 375 aa16.74■□□□□ 0.27
TGFB1-202ENST00000597453 GJB2P29033 226 aa16.74■□□□□ 0.27
TGFB1-202ENST00000597453 NAMPTP43490 491 aa16.74■□□□□ 0.27
TGFB1-202ENST00000597453 TRAPPC10P48553 1259 aa16.74■□□□□ 0.27
TGFB1-202ENST00000597453 TOB1P50616 345 aaPredicted RBP16.74■□□□□ 0.27
TGFB1-202ENST00000597453 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.27
TGFB1-202ENST00000597453 KIFC3Q9BVG8 833 aa16.74■□□□□ 0.27
TGFB1-202ENST00000597453 C2orf40Q9H1Z8 148 aa16.74■□□□□ 0.27
TGFB1-202ENST00000597453 SMC3Q9UQE7 1217 aa16.74■□□□□ 0.27
TGFB1-202ENST00000597453 SSX2IPQ9Y2D8 614 aa16.74■□□□□ 0.27
TGFB1-202ENST00000597453 VWA8A3KMH1 1905 aa16.74■□□□□ 0.27
TGFB1-202ENST00000597453 DOCK8Q8NF50 2099 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 PTGESO14684 152 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 PRKCBP05771 671 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 SPATA31D3P0C874 917 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 LIG1P18858 919 aa16.73■□□□□ 0.27
TGFB1-202ENST00000597453 U2AF2P26368 475 aaKnown RBP eCLIP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms