RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 ZMYM2Q9UBW7 1377 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 NPHP3-ACAD11A0A0J9YXS1 232 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 C2orf71A6NGG8 1288 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 K7ERI5 159 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 NRP1O14786 923 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 NDUFV1P49821 464 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 DMP1Q13316 513 aaPredicted RBP24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 KARSQ15046 597 aaKnown RBP24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 USP49Q70CQ1 688 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 HSCBQ8IWL3 235 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 HACE1Q8IYU2 909 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 VPS52Q8N1B4 723 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 MRPL43Q8N983 215 aaKnown RBP24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 CALML4Q96GE6 196 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 USP28Q96RU2 1077 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 NTPCRQ9BSD7 190 aaKnown RBP24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 CCSER1Q9C0I3 900 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 C17orf75Q9HAS0 396 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 MARCH5Q9NX47 278 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 SNTG2Q9NY99 539 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 PARP2Q9UGN5 583 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 BARX2Q9UMQ3 279 aaPredicted RBP24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 PHLPP2Q6ZVD8 1323 aa24.59■■□□□ 1.53
GTF2F1-204ENST00000594965 MBTPS2O43462 519 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 ALDH2P05091 517 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 PLCG1P19174 1290 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 CEBPZQ03701 1054 aaKnown RBP24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 SMC1AQ14683 1233 aaKnown RBP24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 SPECC1Q5M775 1068 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 ATF7IP2Q5U623 682 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 FAM178BQ8IXR5 827 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 CXCL16Q9H2A7 254 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 ZSCAN16Q9H4T2 348 aaPredicted RBP24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 KMT5AQ9NQR1 393 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 KCND2Q9NZV8 630 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 CD207Q9UJ71 328 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 FAN1Q9Y2M0 1017 aa24.58■■□□□ 1.53
GTF2F1-204ENST00000594965 CTSAP10619 480 aa24.57■■□□□ 1.52
GTF2F1-204ENST00000594965 CACNB1Q02641 598 aaPredicted RBP24.57■■□□□ 1.52
GTF2F1-204ENST00000594965 TMEM132AQ24JP5 1023 aa24.57■■□□□ 1.52
GTF2F1-204ENST00000594965 AUTS2Q8WXX7 1259 aa24.57■■□□□ 1.52
GTF2F1-204ENST00000594965 EPSTI1Q96J88 318 aa24.57■■□□□ 1.52
GTF2F1-204ENST00000594965 CD320Q9NPF0 282 aa24.57■■□□□ 1.52
GTF2F1-204ENST00000594965 SRPRBQ9Y5M8 271 aaKnown RBP24.57■■□□□ 1.52
GTF2F1-204ENST00000594965 CITO14578 2027 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 SLC16A4O15374 487 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 CXCL14O95715 111 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 PLS3P13797 630 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 COASYQ13057 564 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 TMEM184AQ6ZMB5 413 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 SPIRE2Q8WWL2 714 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 CLIC6Q96NY7 704 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 ACO2Q99798 780 aaKnown RBP24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 ADPGKQ9BRR6 497 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 PTPRHQ9HD43 1115 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 TNFSF13BQ9Y275 285 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 PRG3Q9Y2Y8 225 aaPredicted RBP24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 RBM19Q9Y4C8 960 aaKnown RBP24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 MORC2Q9Y6X9 1032 aaPredicted RBP24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 MUC3AQ02505 3323 aa24.56■■□□□ 1.52
GTF2F1-204ENST00000594965 NCOR1O75376 2440 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 F8W810 466 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 CLASP2O75122 1294 aaKnown RBP24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 RECQL4O94761 1208 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 EFEMP2O95967 443 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 OR1G1P47890 313 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 GRIK3Q13003 919 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 SMAD4Q13485 552 aaKnown RBP24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 MCM6Q14566 821 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 SMAD2Q15796 467 aaKnown RBP24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 DCAF4L1Q3SXM0 396 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 GPBP1Q86WP2 473 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 TMEM161BQ8NDZ6 487 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 RAD54LQ92698 747 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 IRAK3Q9Y616 596 aa24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 PDCD11Q14690 1871 aaKnown RBP24.55■■□□□ 1.52
GTF2F1-204ENST00000594965 PTGESO14684 152 aa24.54■■□□□ 1.52
GTF2F1-204ENST00000594965 DHX8Q14562 1220 aaKnown RBP24.54■■□□□ 1.52
GTF2F1-204ENST00000594965 SLC39A14Q15043 492 aa24.54■■□□□ 1.52
GTF2F1-204ENST00000594965 RNF168Q8IYW5 571 aaPredicted RBP24.54■■□□□ 1.52
GTF2F1-204ENST00000594965 SMRP1Q8NCR6 262 aa24.54■■□□□ 1.52
GTF2F1-204ENST00000594965 REEP2Q9BRK0 252 aa24.54■■□□□ 1.52
GTF2F1-204ENST00000594965 TARS2Q9BW92 718 aaKnown RBP24.54■■□□□ 1.52
GTF2F1-204ENST00000594965 MRPL4Q9BYD3 311 aaKnown RBP24.54■■□□□ 1.52
GTF2F1-204ENST00000594965 PLXNA3P51805 1871 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 FSD2A1L4K1 749 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 ABLIM1O14639 778 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 PROZP22891 400 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 NASPP49321 788 aaPredicted RBP24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 PTPN14Q15678 1187 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 NAB2Q15742 525 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 LLGL2Q6P1M3 1020 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 TAS1R1Q7RTX1 841 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 RPS6KC1Q96S38 1066 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 CACNG4Q9UBN1 327 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 ODF2LQ9ULJ1 636 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 GDAQ9Y2T3 454 aa24.53■■□□□ 1.52
GTF2F1-204ENST00000594965 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 LILRB3O75022 631 aa24.52■■□□□ 1.52
GTF2F1-204ENST00000594965 MAPTP10636 758 aaKnown RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms