RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 FOXN3O00409 490 aaPredicted RBP11.23□□□□□ -0.61
VPS25-203ENST00000589520 DDX3XO00571 662 aaKnown RBP eCLIP11.23□□□□□ -0.619e-14■■■□□ 17.4
VPS25-203ENST00000589520 ENC1O14682 589 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 MAGEB2O15479 319 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 GH1P01241 217 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 PGK2P07205 417 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 ADRB2P07550 413 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 HOXC6P09630 235 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 DLG4P78352 724 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 CCL15Q16663 113 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 CFAP221Q4G0U5 840 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 MEI1Q5TIA1 1274 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 CCDC181Q5TID7 509 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 WDR78Q5VTH9 848 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 CDCA2Q69YH5 1023 aaPredicted RBP11.23□□□□□ -0.61
VPS25-203ENST00000589520 WDR93Q6P2C0 686 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 SLC39A4Q6P5W5 647 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 ARMCX2Q7L311 632 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 TAS1R3Q7RTX0 852 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 RHOT2Q8IXI1 618 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 MMGT1Q8N4V1 131 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 LRRN4CLQ8ND94 238 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 ASAP3Q8TDY4 903 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 CTNNBL1Q8WYA6 563 aaPredicted RBP11.23□□□□□ -0.61
VPS25-203ENST00000589520 TAF4BQ92750 862 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 TMEM143Q96AN5 459 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 CCDC127Q96BQ5 260 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 OSBPL9Q96SU4 736 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 SYT11Q9BT88 431 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 NFKBIZQ9BYH8 718 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 GPR88Q9GZN0 384 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 ARFGAP3Q9NP61 516 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 ERAP1Q9NZ08 941 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 TFR2Q9UP52 801 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 CAPN6Q9Y6Q1 641 aa11.23□□□□□ -0.61
VPS25-203ENST00000589520 A0A0B4J269 797 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 GOLGA8IPA6NC78 632 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 GOLGA8JA6NMD2 632 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 TISP43B9A030 160 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 BTBD19C9JJ37 291 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 TOM1L1O75674 476 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 PALMO75781 387 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 COL1A2P08123 1366 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 MAPK4P31152 587 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 NOP2P46087 812 aaKnown RBP11.22□□□□□ -0.61
VPS25-203ENST00000589520 CLCN6P51797 869 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 HADHBP55084 474 aaKnown RBP11.22□□□□□ -0.61
VPS25-203ENST00000589520 CDC42EP1Q00587 391 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 PLCB4Q15147 1175 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 RPS6KA1Q15418 735 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 ENOX2Q16206 610 aaKnown RBP11.22□□□□□ -0.61
VPS25-203ENST00000589520 ARHGAP44Q17R89 818 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 FAM110CQ1W6H9 321 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 MAP9Q49MG5 647 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 GJB7Q6PEY0 223 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 C15orf39Q6ZRI6 1047 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 SV2AQ7L0J3 742 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 SLFN11Q7Z7L1 901 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 ZNF677Q86XU0 584 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 CREG2Q8IUH2 290 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 ADGRA3Q8IWK6 1321 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 FAM71AQ8IYT1 594 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 U2AF1L4Q8WU68 220 aaKnown RBP11.22□□□□□ -0.61
VPS25-203ENST00000589520 PRPF31Q8WWY3 499 aaKnown RBP11.22□□□□□ -0.61
VPS25-203ENST00000589520 SHC3Q92529 594 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 SAAL1Q96ER3 474 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 KIFC3Q9BVG8 833 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 SELENOOQ9BVL4 669 aa11.22□□□□□ -0.61
VPS25-203ENST00000589520 NCANO14594 1321 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 A0A0U1RQG5 324 aaPredicted RBP11.21□□□□□ -0.61
VPS25-203ENST00000589520 CLDN3O15551 220 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 BUB1O43683 1085 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 RTN2O75298 545 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 PPFIA4O75335 1185 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 ARIH2O95376 493 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 CYP2C8P10632 490 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 TNNI1P19237 187 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 SOX10P56693 466 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 MAP2K1Q02750 393 aaPredicted RBP11.21□□□□□ -0.61
VPS25-203ENST00000589520 PRPF4BQ13523 1007 aaKnown RBP11.21□□□□□ -0.61
VPS25-203ENST00000589520 MAPK6Q16659 721 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 KYAT1Q16773 422 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 SPRYD7Q5W111 196 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 MAP1SQ66K74 1059 aaPredicted RBP11.21□□□□□ -0.61
VPS25-203ENST00000589520 EEPD1Q7L9B9 569 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 ANKRD13CQ8N6S4 541 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 PPTC7Q8NI37 304 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 PLEKHO2Q8TD55 490 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 HELQQ8TDG4 1101 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 RFFLQ8WZ73 363 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 MMS19Q96T76 1030 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 FAM213AQ9BRX8 229 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 MSTO1Q9BUK6 570 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 TLR10Q9BXR5 811 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 ISCUQ9H1K1 167 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 EFCC1Q9HA90 598 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 SUCLA2Q9P2R7 463 aaPredicted RBP11.21□□□□□ -0.61
VPS25-203ENST00000589520 HDAC6Q9UBN7 1215 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 SALL4Q9UJQ4 1053 aa11.21□□□□□ -0.61
VPS25-203ENST00000589520 AJAP1Q9UKB5 411 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms