RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 APOL5Q9BWW9 433 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 C1QTNF1Q9BXJ1 281 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 MARCH5Q9NX47 278 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 IRAK3Q9Y616 596 aa23.66■■□□□ 1.38
PPP4R1-228ENST00000584074 CCDC169A6NNP5 214 aa23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 F8W810 466 aa23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 PI4K2BG5E9Z4 385 aa23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 SSBP05455 408 aaKnown RBP eCLIP23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 NPTX2P47972 431 aa23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 MAPK7Q13164 816 aa23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 PTPN14Q15678 1187 aa23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 NT5DC1Q5TFE4 455 aa23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 POP1Q99575 1024 aaKnown RBP23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 S1PR5Q9H228 398 aa23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 SNTG2Q9NY99 539 aa23.65■■□□□ 1.38
PPP4R1-228ENST00000584074 PDCP20941 246 aa23.64■■□□□ 1.37
PPP4R1-228ENST00000584074 RAD51AP2Q09MP3 1159 aa23.64■■□□□ 1.37
PPP4R1-228ENST00000584074 TMEM87AQ8NBN3 555 aa23.64■■□□□ 1.37
PPP4R1-228ENST00000584074 SUSD6Q92537 303 aa23.64■■□□□ 1.37
PPP4R1-228ENST00000584074 CASP10Q92851 521 aa23.64■■□□□ 1.37
PPP4R1-228ENST00000584074 CDK5RAP3Q96JB5 506 aa23.64■■□□□ 1.37
PPP4R1-228ENST00000584074 DRC1Q96MC2 740 aa23.64■■□□□ 1.37
PPP4R1-228ENST00000584074 SFI1A8K8P3 1242 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 K7ERI5 159 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 HOXB8P17481 243 aaPredicted RBP23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 GIT2Q14161 759 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 SF3A1Q15459 793 aaKnown RBP23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 TMEM119Q4V9L6 283 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 TAS1R1Q7RTX1 841 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 CABP7Q86V35 215 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 SYT2Q8N9I0 419 aaPredicted RBP23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 AK8Q96MA6 479 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 ADPGKQ9BRR6 497 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 NT5C3AQ9H0P0 336 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 CXCL16Q9H2A7 254 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 STK39Q9UEW8 545 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 ZMYM2Q9UBW7 1377 aa23.63■■□□□ 1.37
PPP4R1-228ENST00000584074 NR1I2O75469 434 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 RECQL4O94761 1208 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 EPCAMP16422 314 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 SYT1P21579 422 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 GUCY2CP25092 1073 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 SLC12A3P55017 1021 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 GRIN1Q05586 938 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 GRIK3Q13003 919 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 DMP1Q13316 513 aaPredicted RBP23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 ATF7IP2Q5U623 682 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 RABGGTAQ92696 567 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 RPS6KC1Q96S38 1066 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 KMT5AQ9NQR1 393 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 FOXD4L1Q9NU39 408 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 CACNG4Q9UBN1 327 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 CDH22Q9UJ99 828 aa23.62■■□□□ 1.37
PPP4R1-228ENST00000584074 PTGESO14684 152 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 LILRB3O75022 631 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 EFEMP2O95967 443 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 BMP15O95972 392 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 SOD2P04179 222 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 PLA2G4BP0C869 781 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 TAS1R3Q7RTX0 852 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 KCTD17Q8N5Z5 321 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 SLC22A17Q8WUG5 538 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 TIPINQ9BVW5 301 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 COLEC11Q9BWP8 271 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 C11orf16Q9NQ32 467 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 GDAQ9Y2T3 454 aa23.61■■□□□ 1.37
PPP4R1-228ENST00000584074 FAM86C2PA6NEL3 165 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 C2CD2LO14523 706 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 CNPP09543 421 aaKnown RBP23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 UBA7P41226 1012 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 CBX2Q14781 532 aaPredicted RBP23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 DCAF4L1Q3SXM0 396 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 TPRNQ4KMQ1 711 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 LRRC15Q8TF66 581 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 INTS4Q96HW7 963 aaKnown RBP23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 KLHL5Q96PQ7 755 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 PAAF1Q9BRP4 392 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 HERC2P3Q9BVR0 1158 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 PHF7Q9BWX1 381 aaPredicted RBP23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 C17orf75Q9HAS0 396 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 MRPL17Q9NRX2 175 aaKnown RBP23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 ARHGAP28Q9P2N2 729 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 CLIC4Q9Y696 253 aa23.6■■□□□ 1.37
PPP4R1-228ENST00000584074 PHLPP2Q6ZVD8 1323 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 NPHP3-ACAD11A0A0J9YXS1 232 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 LOC730098B7Z3J9 87 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 K7ELQ4 463 aaPredicted RBP23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 SLC16A4O15374 487 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 DCXO43602 365 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 ALADP13716 330 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 RESTQ13127 1097 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 KANK3Q6NY19 840 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 FAM173BQ6P4H8 233 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 RNF135Q8IUD6 432 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 RNF168Q8IYW5 571 aaPredicted RBP23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 C12orf76Q8N812 135 aaPredicted RBP23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 RPGRIP1Q96KN7 1286 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 ACO2Q99798 780 aaKnown RBP23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 EMILIN2Q9BXX0 1053 aa23.59■■□□□ 1.37
PPP4R1-228ENST00000584074 TMEM134Q9H6X4 195 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms