RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 TMEM132AQ24JP5 1023 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 ATF7IP2Q5U623 682 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 FOXD4L5Q5VV16 416 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 PLPP4Q5VZY2 271 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 EEF1DP3Q658K8 133 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 EP400NLQ6ZTU2 488 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 TAS1R3Q7RTX0 852 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 TMC7Q7Z402 723 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 RBM23Q86U06 439 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 LINC00301Q8NCQ3 95 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 ADAMTS19Q8TE59 1207 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 BCL7CQ8WUZ0 217 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 SPIRE2Q8WWL2 714 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 FOXD4L4Q8WXT5 416 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 RAD54LQ92698 747 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 TMEM169Q96HH4 297 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 FAM193BQ96PV7 902 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 ACO2Q99798 780 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 ADPGKQ9BRR6 497 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 TMEM175Q9BSA9 504 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 NGRNQ9NPE2 291 aaKnown RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 SNTG2Q9NY99 539 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 DAXXQ9UER7 740 aaPredicted RBP11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 PARP2Q9UGN5 583 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 KCNG1Q9UIX4 513 aa11.3□□□□□ -0.6
PPP4R1-220ENST00000581835 ZMYM2Q9UBW7 1377 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 TCHHQ07283 1943 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 HIDE1A8MVS5 230 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 NRP1O14786 923 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 PER2O15055 1255 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 SLC16A4O15374 487 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 F13A1P00488 732 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 DDIT3P35638 169 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 SMTNP53814 917 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 DSC1Q08554 894 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 PKP1Q13835 747 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 STK38Q15208 465 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 DUSP6Q16828 381 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 DCAF4L1Q3SXM0 396 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 DDX53Q86TM3 631 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 GPBP1Q86WP2 473 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 COLGALT2Q8IYK4 626 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 EFHBQ8N7U6 833 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 KRI1Q8N9T8 703 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 TMEM161BQ8NDZ6 487 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 LARP4BQ92615 738 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 CDCA3Q99618 268 aaPredicted RBP11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 REEP2Q9BRK0 252 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 TLE6Q9H808 572 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 PTPRHQ9HD43 1115 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 ENTPD7Q9NQZ7 604 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 KLK14Q9P0G3 267 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 TFIP11Q9UBB9 837 aaKnown RBP11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 CCDC39Q9UFE4 941 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 ODF2LQ9ULJ1 636 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 TNFSF13BQ9Y275 285 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 FAN1Q9Y2M0 1017 aa11.29□□□□□ -0.6
PPP4R1-220ENST00000581835 PPP6R2O75170 966 aa11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 TBX10O75333 385 aa11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 GLP2RO95838 553 aa11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 ZNF131P52739 623 aa11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 GIT2Q14161 759 aa11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 PTCRAQ6ISU1 281 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 VPS52Q8N1B4 723 aa11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 UHRF1Q96T88 793 aaPredicted RBP11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 TARS2Q9BW92 718 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 VN1R3Q9BXE9 311 aa11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 MRPL4Q9BYD3 311 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 ZBP1Q9H171 429 aa11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 MARCH5Q9NX47 278 aa11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 LARSQ9P2J5 1176 aaKnown RBP11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 STK17AQ9UEE5 414 aa11.28□□□□□ -0.6
PPP4R1-220ENST00000581835 GRXCR2A6NFK2 248 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 C2orf71A6NGG8 1288 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 ABLIM1O14639 778 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 PTGESO14684 152 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 SPTLC2O15270 562 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 RECQL4O94761 1208 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 FAM13AO94988 1023 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 YEATS4O95619 227 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 CXCL14O95715 111 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 CTSAP10619 480 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 MAPTP10636 758 aaKnown RBP11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 PROZP22891 400 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 TXLNAP40222 546 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 OR1G1P47890 313 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 NDUFV1P49821 464 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 NCKAP1LP55160 1127 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 RBM10P98175 930 aaKnown RBP11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 GRIK3Q13003 919 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 KCNC3Q14003 757 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 SMC1AQ14683 1233 aaKnown RBP11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 RRAGBQ5VZM2 374 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 CEP120Q8N960 986 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 VN1R2Q8NFZ6 395 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 KCNN1Q92952 543 aa11.27□□□□□ -0.61
PPP4R1-220ENST00000581835 MSLNLQ96KJ4 702 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms