RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 GLIS3Q8NEA6 775 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 DBF4BQ8NFT6 615 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 SCLYQ96I15 445 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 ZNF668Q96K58 619 aaPredicted RBP11.39□□□□□ -0.59
CCDC47-203ENST00000580986 LBHD1Q9BQE6 289 aaPredicted RBP11.39□□□□□ -0.59
CCDC47-203ENST00000580986 ADPGKQ9BRR6 497 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 ANP32EQ9BTT0 268 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 FUCA2Q9BTY2 467 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 OSBPL7Q9BZF2 842 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 TMX1Q9H3N1 280 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 RGS18Q9NS28 235 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 PIN4Q9Y237 131 aaKnown RBP11.39□□□□□ -0.59
CCDC47-203ENST00000580986 TET1Q8NFU7 2136 aa11.39□□□□□ -0.59
CCDC47-203ENST00000580986 A0A0B4J269 797 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 A0A0U1RQF3 1178 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 BICDL2A1A5D9 508 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 PPP1R3GB7ZBB8 358 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 CLDN3O15551 220 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 B4GALT5O43286 388 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 CSDE1O75534 798 aaKnown RBP11.38□□□□□ -0.59
CCDC47-203ENST00000580986 EDN1P05305 212 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 CCDC192P0DO97 292 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 MCF2P10911 925 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 ACTN1P12814 892 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 CCNE1P24864 410 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 KCNA1Q09470 495 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 NFX1Q12986 1120 aaKnown RBP11.38□□□□□ -0.59
CCDC47-203ENST00000580986 IKBKEQ14164 716 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 ZSCAN23Q3MJ62 389 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 SLC39A4Q6P5W5 647 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 SLC24A5Q71RS6 500 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 ZC3H3Q8IXZ2 948 aaKnown RBP11.38□□□□□ -0.59
CCDC47-203ENST00000580986 SYCP3Q8IZU3 236 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 BADQ92934 168 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 BICD1Q96G01 975 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 TARS2Q9BW92 718 aaKnown RBP11.38□□□□□ -0.59
CCDC47-203ENST00000580986 PDZD7Q9H5P4 517 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 ELAC1Q9H777 363 aaKnown RBP11.38□□□□□ -0.59
CCDC47-203ENST00000580986 AGPAT3Q9NRZ7 376 aa11.38□□□□□ -0.59
CCDC47-203ENST00000580986 TNRC18O15417 2968 aaPredicted RBP11.38□□□□□ -0.59
CCDC47-203ENST00000580986 COL4A6Q14031 1691 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 C9IYK1 514 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 BIN1O00499 593 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 STK25O00506 426 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 MAPK13O15264 365 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 CALUO43852 315 aaPredicted RBP11.37□□□□□ -0.59
CCDC47-203ENST00000580986 EOMESO95936 686 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 LDHAP00338 332 aaKnown RBP11.37□□□□□ -0.59
CCDC47-203ENST00000580986 ADSSP30520 456 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 FAM189BP81408 668 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 TYRO3Q06418 890 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 ENPEPQ07075 957 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 PAK1Q13153 545 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 NOLC1Q14978 699 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCDC47-203ENST00000580986 DPCR1Q3MIW9 517 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 ZNF568Q3ZCX4 644 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 TWF2Q6IBS0 349 aaKnown RBP11.37□□□□□ -0.59
CCDC47-203ENST00000580986 MRPL10Q7Z7H8 261 aaKnown RBP11.37□□□□□ -0.59
CCDC47-203ENST00000580986 SMYD4Q8IYR2 804 aaPredicted RBP11.37□□□□□ -0.59
CCDC47-203ENST00000580986 HACE1Q8IYU2 909 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 CRIPAKQ8N1N5 446 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 P2RX5Q93086 422 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 FBXL18Q96ME1 805 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 ADAM2Q99965 735 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 BPIFA3Q9BQP9 254 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 MFRPQ9BY79 579 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 CDT1Q9H211 546 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 MTIF3Q9H2K0 278 aaKnown RBP11.37□□□□□ -0.59
CCDC47-203ENST00000580986 KIAA1586Q9HCI6 787 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 FAM105AQ9NUU6 356 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 DMAC2Q9NW81 257 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 RWDD2AQ9UIY3 292 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 RALGAPA2Q2PPJ7 1873 aa11.37□□□□□ -0.59
CCDC47-203ENST00000580986 TTC3P53804 2025 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 OGTO15294 1046 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 INPPL1O15357 1258 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 FAM189A1O60320 539 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 MGEA5O60502 916 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 FGFR4P22455 802 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 RPL13P26373 211 aaKnown RBP11.36□□□□□ -0.59
CCDC47-203ENST00000580986 BMP8BP34820 402 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 GRM5P41594 1212 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 ZNF445P59923 1031 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 MCCD1P59942 119 aaPredicted RBP11.36□□□□□ -0.59
CCDC47-203ENST00000580986 TMEM240Q5SV17 173 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 UBXN11Q5T124 520 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 RASIP1Q5U651 963 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 TTI2Q6NXR4 508 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 ARMCX5Q6P1M9 558 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 NELFCDQ8IXH7 590 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 LINC01599Q8WXQ3 324 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 POMGNT1Q8WZA1 660 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 HERVK_113Q902F9 699 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 TSPAN18Q96SJ8 248 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 TSG101Q99816 390 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 GDF15Q99988 308 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 MKNK1Q9BUB5 465 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 NAT10Q9H0A0 1025 aaKnown RBP11.36□□□□□ -0.59
CCDC47-203ENST00000580986 SEMA6BQ9H3T3 888 aa11.36□□□□□ -0.59
CCDC47-203ENST00000580986 UBN1Q9NPG3 1134 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms