RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 C1orf186Q6ZWK4 172 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 RNF168Q8IYW5 571 aaPredicted RBP16.18■□□□□ 0.18
FANCA-220ENST00000566409 FEZF2Q8TBJ5 459 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 SLC22A17Q8WUG5 538 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 KIFAP3Q92845 792 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 DNM3Q9UQ16 869 aa16.18■□□□□ 0.18
FANCA-220ENST00000566409 VWA3AA6NCI4 1184 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 LOC730098B7Z3J9 87 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 GPR37L1O60883 481 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 SSBP05455 408 aaKnown RBP eCLIP16.17■□□□□ 0.18
FANCA-220ENST00000566409 EPCAMP16422 314 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 LIG1P18858 919 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 CA8P35219 290 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 OR1G1P47890 313 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 PPP2R5AQ15172 486 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 NT5DC1Q5TFE4 455 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 KANK3Q6NY19 840 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 DEPTORQ8TB45 409 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 PLIN2Q99541 437 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 SNTG2Q9NY99 539 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 CACNG4Q9UBN1 327 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 PARP2Q9UGN5 583 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 TECTAO75443 2155 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 MYO10Q9HD67 2058 aa16.17■□□□□ 0.18
FANCA-220ENST00000566409 PLXNA3P51805 1871 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 PTGESO14684 152 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 N4BP3O15049 544 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 HIP1RO75146 1068 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 HOXB8P17481 243 aaPredicted RBP16.16■□□□□ 0.18
FANCA-220ENST00000566409 NPTX2P47972 431 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 CBX2Q14781 532 aaPredicted RBP16.16■□□□□ 0.18
FANCA-220ENST00000566409 ZRSR1Q15695 479 aaKnown RBP16.16■□□□□ 0.18
FANCA-220ENST00000566409 ARL6IP4Q66PJ3 421 aaKnown RBP16.16■□□□□ 0.18
FANCA-220ENST00000566409 TAS1R3Q7RTX0 852 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 RNF135Q8IUD6 432 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 C12orf76Q8N812 135 aaPredicted RBP16.16■□□□□ 0.18
FANCA-220ENST00000566409 LRRC15Q8TF66 581 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 RABGGTAQ92696 567 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 CASP10Q92851 521 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 IFT74Q96LB3 600 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 POP1Q99575 1024 aaKnown RBP16.16■□□□□ 0.18
FANCA-220ENST00000566409 PAAF1Q9BRP4 392 aa16.16■□□□□ 0.18
FANCA-220ENST00000566409 PHF7Q9BWX1 381 aaPredicted RBP16.16■□□□□ 0.18
FANCA-220ENST00000566409 ZMYM2Q9UBW7 1377 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 SFI1A8K8P3 1242 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 DCXO43602 365 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 SOD2P04179 222 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 CNPP09543 421 aaKnown RBP16.15■□□□□ 0.18
FANCA-220ENST00000566409 SRGAP2BP0DMP2 458 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 ALADP13716 330 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 EFNA5P52803 228 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 PEX3P56589 373 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 GRIN1Q05586 938 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 GIT2Q14161 759 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 BMS1Q14692 1282 aaKnown RBP16.15■□□□□ 0.18
FANCA-220ENST00000566409 NAB2Q15742 525 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 TMEM31Q5JXX7 168 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 KIAA0319Q5VV43 1072 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 HACE1Q8IYU2 909 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 KLHL5Q96PQ7 755 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 MUTYHQ9UIF7 546 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 C2orf16Q68DN1 1984 aa16.15■□□□□ 0.18
FANCA-220ENST00000566409 CCDC169A6NNP5 214 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 K7ERI5 159 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 RECQL4O94761 1208 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 SLC12A3P55017 1021 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 RAD51AP2Q09MP3 1159 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 GRIK3Q13003 919 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 TMEM119Q4V9L6 283 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 ATF7IP2Q5U623 682 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 SYT2Q8N9I0 419 aaPredicted RBP16.14■□□□□ 0.17
FANCA-220ENST00000566409 RPGRIP1Q96KN7 1286 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 B3GALT6Q96L58 329 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 HERC2P3Q9BVR0 1158 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 GPR62Q9BZJ7 368 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 ADAM7Q9H2U9 754 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 CHST7Q9NS84 486 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 ARHGAP28Q9P2N2 729 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 MUC6Q6W4X9 2439 aa16.14■□□□□ 0.17
FANCA-220ENST00000566409 MTCL1Q9Y4B5 1905 aaKnown RBP16.13■□□□□ 0.17
FANCA-220ENST00000566409 C2CD2LO14523 706 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 WEE2P0C1S8 567 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 IGFBP6P24592 240 aaPredicted RBP16.13■□□□□ 0.17
FANCA-220ENST00000566409 GUCY2CP25092 1073 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 CLCN4P51793 760 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 SF3A1Q15459 793 aaKnown RBP16.13■□□□□ 0.17
FANCA-220ENST00000566409 TMEM132AQ24JP5 1023 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 ARSHQ5FYA8 562 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 HERC4Q5GLZ8 1057 aaPredicted RBP16.13■□□□□ 0.17
FANCA-220ENST00000566409 BRAPQ7Z569 592 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 RPS6KC1Q96S38 1066 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 ACO2Q99798 780 aaKnown RBP16.13■□□□□ 0.17
FANCA-220ENST00000566409 NTPCRQ9BSD7 190 aaKnown RBP16.13■□□□□ 0.17
FANCA-220ENST00000566409 COLEC11Q9BWP8 271 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 TMEM134Q9H6X4 195 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 PTPRHQ9HD43 1115 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 MRPL17Q9NRX2 175 aaKnown RBP16.13■□□□□ 0.17
FANCA-220ENST00000566409 STK39Q9UEW8 545 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 TNFSF13BQ9Y275 285 aa16.13■□□□□ 0.17
FANCA-220ENST00000566409 GDAQ9Y2T3 454 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms