RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 USO1O60763 962 aaKnown RBP14.41□□□□□ -0.1
SF3B3-202ENST00000562722 RFPL2O75678 378 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 LYPLA2O95372 231 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 GLRA2P23416 452 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 DSG1Q02413 1049 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 POU5F1BQ06416 359 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 DSC1Q08554 894 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 KIAA0319Q5VV43 1072 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 FUT10Q6P4F1 479 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 SLC27A1Q6PCB7 646 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 SIX5Q8N196 739 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 CMASQ8NFW8 434 aaPredicted RBP14.41□□□□□ -0.1
SF3B3-202ENST00000562722 HSD17B14Q9BPX1 270 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 WDR6Q9NNW5 1121 aaKnown RBP14.41□□□□□ -0.1
SF3B3-202ENST00000562722 MIOSQ9NXC5 875 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 KLK14Q9P0G3 267 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 IGSF9Q9P2J2 1179 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 DUSP12Q9UNI6 340 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 A0A087WWV3 80 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 TADA2AO75478 443 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 CFHP08603 1231 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 ATP2B1P20020 1258 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 ARL2P36404 184 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 RARRES1P49788 294 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 GRIK3Q13003 919 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 AMHR2Q16671 573 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 USP41Q3LFD5 358 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 CWF19L1Q69YN2 538 aaKnown RBP14.4□□□□□ -0.1
SF3B3-202ENST00000562722 CYP26C1Q6V0L0 522 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 IFNLR1Q8IU57 520 aaPredicted RBP14.4□□□□□ -0.1
SF3B3-202ENST00000562722 DIS3L2Q8IYB7 885 aaKnown RBP14.4□□□□□ -0.1
SF3B3-202ENST00000562722 RIN2Q8WYP3 895 aaPredicted RBP14.4□□□□□ -0.1
SF3B3-202ENST00000562722 RABGGTAQ92696 567 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 TNFRSF25Q93038 417 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 RXFP1Q9HBX9 757 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.4□□□□□ -0.1
SF3B3-202ENST00000562722 DENND4AQ7Z401 1863 aa14.4□□□□□ -0.1
SF3B3-202ENST00000562722 ARID2Q68CP9 1835 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 MYO10Q9HD67 2058 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 POTEMA6NI47 508 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 BTBD18B2RXH4 712 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 TGM5O43548 720 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 NARSO43776 548 aaKnown RBP14.39□□□□□ -0.11
SF3B3-202ENST00000562722 FDPSP14324 419 aaKnown RBP14.39□□□□□ -0.11
SF3B3-202ENST00000562722 RPL17P18621 184 aaKnown RBP14.39□□□□□ -0.11
SF3B3-202ENST00000562722 AOC1P19801 751 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 ANAPC15P60006 121 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 CREMQ03060 361 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 ME3Q16798 604 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 ASCL5Q7RTU5 278 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 FRMD5Q7Z6J6 570 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 ZBTB8OSQ8IWT0 167 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 RNF168Q8IYW5 571 aaPredicted RBP14.39□□□□□ -0.11
SF3B3-202ENST00000562722 RSAD2Q8WXG1 361 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 GTF3C6Q969F1 213 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 NFKBIZQ9BYH8 718 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 PLEKHA4Q9H4M7 779 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 GPRC5CQ9NQ84 441 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 ADAM28Q9UKQ2 775 aa14.39□□□□□ -0.11
SF3B3-202ENST00000562722 PRR23AA6NEV1 266 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 PROB1E7EW31 1015 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 PI15O43692 258 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 N4BP1O75113 896 aaKnown RBP14.38□□□□□ -0.11
SF3B3-202ENST00000562722 NEFLP07196 543 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 NPR3P17342 541 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 LIG1P18858 919 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 MCM7P33993 719 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 NBL1P41271 181 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 GET4Q7L5D6 327 aaPredicted RBP14.38□□□□□ -0.11
SF3B3-202ENST00000562722 MCPH1Q8NEM0 835 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 HASPINQ8TF76 798 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 HDAC7Q8WUI4 952 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 NKD2Q969F2 451 aaPredicted RBP14.38□□□□□ -0.11
SF3B3-202ENST00000562722 RTP3Q9BQQ7 232 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 GPR62Q9BZJ7 368 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 CHST7Q9NS84 486 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 PRMT7Q9NVM4 692 aaPredicted RBP14.38□□□□□ -0.11
SF3B3-202ENST00000562722 EPS15L1Q9UBC2 864 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 CA14Q9ULX7 337 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 USP34Q70CQ2 3546 aa14.38□□□□□ -0.11
SF3B3-202ENST00000562722 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.11
SF3B3-202ENST00000562722 A0A1B0GUA9 196 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 CASTOR2A6NHX0 329 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 WNT7AO00755 349 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 JAK2O60674 1132 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 LARGE1O95461 756 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 EFEMP2O95967 443 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 HSP90AA2PQ14568 343 aaPredicted RBP14.37□□□□□ -0.11
SF3B3-202ENST00000562722 SAFBQ15424 915 aaKnown RBP eCLIP14.37□□□□□ -0.11
SF3B3-202ENST00000562722 PRSS55Q6UWB4 352 aaPredicted RBP14.37□□□□□ -0.11
SF3B3-202ENST00000562722 CEP57Q86XR8 500 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 CCDC105Q8IYK2 499 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 NSUN7Q8NE18 718 aaKnown RBP14.37□□□□□ -0.11
SF3B3-202ENST00000562722 GSTCDQ8NEC7 633 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 ZNF707Q96C28 371 aaPredicted RBP14.37□□□□□ -0.11
SF3B3-202ENST00000562722 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 MYADMQ96S97 322 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 NT5C3AQ9H0P0 336 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 ZDHHC7Q9NXF8 308 aa14.37□□□□□ -0.11
SF3B3-202ENST00000562722 CACNG4Q9UBN1 327 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 175.1 ms