RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 GLT8D2Q9H1C3 349 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 KCND1Q9NSA2 647 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 A0A087WXM4 84 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 CCDC195A0A1B0GUA6 201 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 SAR1AQ9NR31 198 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 FCHO1O14526 889 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 TBC1D4O60343 1298 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 CCNCP24863 283 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 GARSP41250 739 aaKnown RBP3.9□□□□□ -1.79
ATXN3-248ENST00000558190 KCNJ6P48051 423 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 HIC1Q14526 733 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 LUZP2Q86TE4 346 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 ZBTB18Q99592 522 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 ARHGEF37A1IGU5 675 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 CIITAP33076 1130 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF589Q86UQ0 364 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-248ENST00000558190 GPKOWQ92917 476 aaPredicted RBP eCLIP3.9□□□□□ -1.79
ATXN3-248ENST00000558190 AVENQ9NQS1 362 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-248ENST00000558190 MOSPD1Q9UJG1 213 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 SYNJ2BP-COX16A0A087WUM0 186 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 CYTH3O43739 400 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 AKR1D1P51857 326 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 GABPB2Q8TAK5 448 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-248ENST00000558190 PIF1Q9H611 641 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 COX16Q9P0S2 106 aa3.9□□□□□ -1.79
ATXN3-248ENST00000558190 ANKRD36BQ8N2N9 1353 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ARSEP51690 589 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 LRRC24Q50LG9 513 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 FAM26FQ5R3K3 315 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 IPPQ9Y573 584 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SDR42E2A6NKP2 422 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TOM1O60784 492 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 VAV1P15498 845 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 AQP5P55064 265 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 BBS7Q8IWZ6 715 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 C19orf18Q8NEA5 215 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 KCNK16Q96T55 309 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SLC52A1Q9NWF4 448 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 H2AFY2Q9P0M6 372 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ZNF532Q9HCE3 1301 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 POLD3Q15054 466 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CREG2Q8IUH2 290 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 KYQ8NBH2 561 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 WNK4Q96J92 1243 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CELF4Q9BZC1 486 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 A0A1W2PQC6 194 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PDLIM1O00151 329 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PRPSAP2O60256 369 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 P4HBP07237 508 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 COMTP21964 271 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CBX3Q13185 183 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TSC22D1Q15714 1073 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CNOT6LQ96LI5 555 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 DCUN1D5Q9BTE7 237 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 RPRD1BQ9NQG5 326 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PNMA8BQ9ULN7 279 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SUGT1Q9Y2Z0 365 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 LRRC53A6NM62 1247 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PPM1FP49593 454 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 IFNL2Q8IZJ0 200 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SFRP1Q8N474 314 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ERLEC1Q96DZ1 483 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CACNA2D2Q9NY47 1150 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TFRCP02786 760 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SSTR3P32745 418 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CCR3P51677 355 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SNX17Q15036 470 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 KCNH5Q8NCM2 988 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 FAM118BQ9BPY3 351 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 UPF3AQ9H1J1 476 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 BABAM1Q9NWV8 329 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CYP2D7A0A087X1C5 515 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CPA3P15088 417 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 GUCY1A2P33402 732 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 GCLMP48507 274 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CHI3L2Q15782 390 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 DGUOKQ16854 277 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PERM1Q5SV97 790 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 JAMLQ86YT9 394 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 CLVS1Q8IUQ0 354 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SLC4A9Q96Q91 983 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 DEPDC7Q96QD5 511 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 ANO9A1A5B4 782 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TAF4O00268 1085 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 KCNA1Q09470 495 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 LAMC2Q13753 1193 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 BLMHQ13867 455 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TRIM63Q969Q1 353 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 NOL11Q9H8H0 719 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PPP1R1BQ9UD71 204 aaPredicted RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TRIM64CA6NLI5 447 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SPAG6O75602 509 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SNAP25P60880 206 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 DEPTORQ8TB45 409 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TMCO1Q9UM00 188 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 NR3C1P04150 777 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 PSMA2P25787 234 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 IFNA8P32881 189 aa3.89□□□□□ -1.79
ATXN3-248ENST00000558190 SERPINH1P50454 418 aaKnown RBP3.89□□□□□ -1.79
ATXN3-248ENST00000558190 TAF5Q15542 800 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms