RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 ZNF577Q9BSK1 485 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 ENO4A6NNW6 628 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 ZSCAN5DPP0CG00 497 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 BMP3P12645 472 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 SMARCA1P28370 1054 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 PEX3P56589 373 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 GPC5P78333 572 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 XRCC4Q13426 336 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 EMC10Q5UCC4 262 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 SYDE2Q5VT97 1194 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 NAIF1Q69YI7 327 aaPredicted RBP18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 C1orf186Q6ZWK4 172 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 CDAN1Q8IWY9 1227 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 SUPT20HQ8NEM7 779 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 ANAPC7Q9UJX3 599 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 CEP350Q5VT06 3117 aa18.29■□□□□ 0.52
PPP4R3A-208ENST00000555462 CRKP46108 304 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 ITGA8P53708 1063 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 PLA2G4FQ68DD2 849 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 BORCS6Q96GS4 357 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 RBM17Q96I25 401 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 TGS1Q96RS0 853 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 KLF6Q99612 283 aaPredicted RBP18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 UNC45AQ9H3U1 944 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 CNOT10Q9H9A5 744 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 MYH11P35749 1972 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 CD58P19256 250 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 NCALDP61601 193 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 ABCB5Q2M3G0 1257 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 ATP13A4Q4VNC1 1196 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 OTOP1Q7RTM1 612 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 GSTA5Q7RTV2 222 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 SEMA4DQ92854 862 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 LAMB1P07942 1786 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 C5orf60A6NFR6 353 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 hCG_1984214I3L0E3 225 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 SNX3O60493 162 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 ETS1P14921 441 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 TARSP26639 723 aaKnown RBP18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 ORC2Q13416 577 aaPredicted RBP18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 C6orf118Q5T5N4 469 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 SLC13A5Q86YT5 568 aaPredicted RBP18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 ZNF713Q8N859 430 aaPredicted RBP18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 TXLNGYQ9BZA5 131 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 ETNK1Q9HBU6 452 aa18.28■□□□□ 0.52
PPP4R3A-208ENST00000555462 GOLGA8RI6L899 631 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 ECEL1O95672 775 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 PDHA1P08559 390 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 EIF3BP55884 814 aaKnown RBP18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 DRP2Q13474 957 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 PRR12Q9ULL5 1215 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 GAKO14976 1311 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 MGRN1O60291 552 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 VAMP7P51809 220 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 SPDL1Q96EA4 605 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 PAGR1Q9BTK6 254 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 CDCA7Q9BWT1 371 aaPredicted RBP18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 KDM4CQ9H3R0 1056 aa18.27■□□□□ 0.52
PPP4R3A-208ENST00000555462 BTNL10A8MVZ5 291 aa18.27■□□□□ 0.51
PPP4R3A-208ENST00000555462 PADI6Q6TGC4 694 aa18.27■□□□□ 0.51
PPP4R3A-208ENST00000555462 TBC1D22AQ8WUA7 517 aa18.27■□□□□ 0.51
PPP4R3A-208ENST00000555462 POMGNT1Q8WZA1 660 aa18.27■□□□□ 0.51
PPP4R3A-208ENST00000555462 NAP1L3Q99457 506 aaPredicted RBP18.27■□□□□ 0.51
PPP4R3A-208ENST00000555462 HSD17B14Q9BPX1 270 aa18.27■□□□□ 0.51
PPP4R3A-208ENST00000555462 BCRP11274 1271 aa18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 KRT10P13645 584 aa18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 KREMEN1Q96MU8 473 aa18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 AAASQ9NRG9 546 aa18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 CFHP08603 1231 aa18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 NQO1P15559 274 aaKnown RBP18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 PIGWQ7Z7B1 504 aa18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 DAW1Q8N136 415 aa18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 GLIS1Q8NBF1 620 aa18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 GLIS2Q9BZE0 524 aaPredicted RBP18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 HAO1Q9UJM8 370 aa18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 ZMYND8Q9ULU4 1186 aaPredicted RBP18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 NENFQ9UMX5 172 aa18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 USP15Q9Y4E8 981 aaPredicted RBP18.26■□□□□ 0.51
PPP4R3A-208ENST00000555462 PPEF1O14829 653 aaPredicted RBP18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 IFNB1P01574 187 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 MXI1P50539 228 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 FAM102BQ5T8I3 360 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 SPOPLQ6IQ16 392 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 VSTM1Q6UX27 236 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 WDR11Q9BZH6 1224 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 TMEM117Q9H0C3 514 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 MTUS1Q9ULD2 1270 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 CNTNAP4Q9C0A0 1308 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 LGR5O75473 907 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 ADRB2P07550 413 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 CHRNA3P32297 505 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 ADCY2Q08462 1091 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 VSIG1Q86XK7 387 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 FIZ1Q96SL8 496 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 YIPF3Q9GZM5 350 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 INTUQ9ULD6 942 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 CES2O00748 559 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 HARSP12081 509 aaKnown RBP18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 GYS1P13807 737 aa18.25■□□□□ 0.51
PPP4R3A-208ENST00000555462 SREBF1P36956 1147 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms