RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 PSPC1Q8WXF1 523 aaKnown RBP17.16■□□□□ 0.34
BRF1-220ENST00000552127 SECISBP2LQ93073 1101 aaKnown RBP17.16■□□□□ 0.34
BRF1-220ENST00000552127 INO80BQ9C086 356 aaPredicted RBP17.16■□□□□ 0.34
BRF1-220ENST00000552127 DACT1Q9NYF0 836 aa17.16■□□□□ 0.34
BRF1-220ENST00000552127 NT5C1B-RDH14C9J2C7 533 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 ZBTB39O15060 712 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 OR52Z1P0C646 297 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 SRFP11831 508 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 TGM1P22735 817 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 TRAPPC10P48553 1259 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 ZNF528Q3MIS6 628 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 TTC38Q5R3I4 469 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 ABI1Q8IZP0 508 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 PJA1Q8NG27 643 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 TMEM143Q96AN5 459 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 BORCS6Q96GS4 357 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 TBC1D32Q96NH3 1257 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 MTRQ99707 1265 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 FOXQ1Q9C009 403 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 ZBP1Q9H171 429 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 ARHGEF3Q9NR81 526 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 CHST12Q9NRB3 414 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 ANKEF1Q9NU02 776 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 USP18Q9UMW8 372 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 NOL7Q9UMY1 257 aaKnown RBP17.15■□□□□ 0.34
BRF1-220ENST00000552127 KIF3AQ9Y496 699 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 IRAK3Q9Y616 596 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 TDRD15B5MCY1 1934 aaKnown RBP17.15■□□□□ 0.34
BRF1-220ENST00000552127 MIA3Q5JRA6 1907 aa17.15■□□□□ 0.34
BRF1-220ENST00000552127 SPDYE4A6NLX3 237 aa17.14■□□□□ 0.33
BRF1-220ENST00000552127 LRRN2O75325 713 aa17.14■□□□□ 0.33
BRF1-220ENST00000552127 CD2BP2O95400 341 aaKnown RBP17.14■□□□□ 0.33
BRF1-220ENST00000552127 LAMTOR4Q0VGL1 99 aa17.14■□□□□ 0.33
BRF1-220ENST00000552127 ZNF174Q15697 407 aa17.14■□□□□ 0.33
BRF1-220ENST00000552127 CATSPER4Q7RTX7 472 aa17.14■□□□□ 0.33
BRF1-220ENST00000552127 RNF169Q8NCN4 708 aa17.14■□□□□ 0.33
BRF1-220ENST00000552127 PRPF31Q8WWY3 499 aaKnown RBP17.14■□□□□ 0.33
BRF1-220ENST00000552127 TMX3Q96JJ7 454 aa17.14■□□□□ 0.33
BRF1-220ENST00000552127 CCDC43Q96MW1 224 aaKnown RBP17.14■□□□□ 0.33
BRF1-220ENST00000552127 IFT122Q9HBG6 1241 aa17.14■□□□□ 0.33
BRF1-220ENST00000552127 PIN4Q9Y237 131 aaKnown RBP17.14■□□□□ 0.33
BRF1-220ENST00000552127 FASNP49327 2511 aaKnown RBP17.14■□□□□ 0.33
BRF1-220ENST00000552127 PATJQ8NI35 1801 aa17.14■□□□□ 0.33
BRF1-220ENST00000552127 FRYQ5TBA9 3013 aa17.13■□□□□ 0.33
BRF1-220ENST00000552127 A0A0U1RQF3 1178 aa17.13■□□□□ 0.33
BRF1-220ENST00000552127 U2AF2P26368 475 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■□□ 16.3
BRF1-220ENST00000552127 GIT2Q14161 759 aa17.13■□□□□ 0.33
BRF1-220ENST00000552127 CLLU1OSQ5K130 101 aa17.13■□□□□ 0.33
BRF1-220ENST00000552127 TWF2Q6IBS0 349 aaKnown RBP17.13■□□□□ 0.33
BRF1-220ENST00000552127 ZNF598Q86UK7 904 aaKnown RBP17.13■□□□□ 0.33
BRF1-220ENST00000552127 FERMT3Q86UX7 667 aa17.13■□□□□ 0.33
BRF1-220ENST00000552127 TMEM169Q96HH4 297 aa17.13■□□□□ 0.33
BRF1-220ENST00000552127 TRAIPQ9BWF2 469 aa17.13■□□□□ 0.33
BRF1-220ENST00000552127 TUFT1Q9NNX1 390 aa17.13■□□□□ 0.33
BRF1-220ENST00000552127 XPNPEP1Q9NQW7 623 aa17.13■□□□□ 0.33
BRF1-220ENST00000552127 SMG5Q9UPR3 1016 aaKnown RBP17.13■□□□□ 0.33
BRF1-220ENST00000552127 PCDHGA2Q9Y5H1 932 aa17.13■□□□□ 0.33
BRF1-220ENST00000552127 ASAP2O43150 1006 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 DGAT1O75907 488 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 SRGAP2CP0DJJ0 459 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 CTSAP10619 480 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 GBP2P32456 591 aaPredicted RBP17.12■□□□□ 0.33
BRF1-220ENST00000552127 PHKA2P46019 1235 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 ALDH7A1P49419 539 aaKnown RBP17.12■□□□□ 0.33
BRF1-220ENST00000552127 MCM2P49736 904 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 RARRES1P49788 294 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 BCAR1P56945 870 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 DMWDQ09019 674 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 DCLRE1AQ6PJP8 1040 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 C15orf39Q6ZRI6 1047 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 SRGAP1Q7Z6B7 1085 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 ATRIPQ8WXE1 791 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 PARD6AQ9NPB6 346 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 AGPAT5Q9NUQ2 364 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 FBXO4Q9UKT5 387 aa17.12■□□□□ 0.33
BRF1-220ENST00000552127 DOCK8Q8NF50 2099 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 LAMTOR5O43504 91 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 MED24O75448 989 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 SPATA31C1P0DKV0 1188 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 SKIP12755 728 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 RAB27AP51159 221 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 CSTF1Q05048 431 aaKnown RBP17.11■□□□□ 0.33
BRF1-220ENST00000552127 MXD4Q14582 209 aaPredicted RBP17.11■□□□□ 0.33
BRF1-220ENST00000552127 NBR1Q14596 966 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 PTPN14Q15678 1187 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 PPFIBP1Q86W92 1011 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 TMEM173Q86WV6 379 aaPredicted RBP17.11■□□□□ 0.33
BRF1-220ENST00000552127 RNF149Q8NC42 400 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 ERMNQ8TAM6 284 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 PIGOQ8TEQ8 1089 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 POLR3CQ9BUI4 534 aaPredicted RBP17.11■□□□□ 0.33
BRF1-220ENST00000552127 EPC1Q9H2F5 836 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 MINDY3Q9H8M7 445 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 SPATA6Q9NWH7 488 aaPredicted RBP17.11■□□□□ 0.33
BRF1-220ENST00000552127 EPS15L1Q9UBC2 864 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 MYH11P35749 1972 aa17.11■□□□□ 0.33
BRF1-220ENST00000552127 SPEGQ15772 3267 aa17.1■□□□□ 0.33
BRF1-220ENST00000552127 XRCC6P12956 609 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■□□□ 12.3
BRF1-220ENST00000552127 TFDP1Q14186 410 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms