RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 HOXD12P35452 270 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 PCK1P35558 622 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 PAFAH1B1P43034 410 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 PDE6CP51160 858 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 RAD23BP54727 409 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 GEMIN4P57678 1058 aaKnown RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 GRIN1Q05586 938 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 HNRNPDQ14103 355 aaKnown RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 KCNJ12Q14500 433 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 KPNB1Q14974 876 aaKnown RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 SAFBQ15424 915 aaKnown RBP eCLIP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 CNGA2Q16280 664 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 IMMTQ16891 758 aaKnown RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 MTHFSDQ2M296 383 aaKnown RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNF568Q3ZCX4 644 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 CCDC152Q4G0S7 254 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 LIN52Q52LA3 116 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 CCDC92Q53HC0 331 aaPredicted RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 EAPPQ56P03 285 aaPredicted RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 SH2D4BQ5SQS7 431 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 AKNAD1Q5T1N1 836 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 SULT6B1Q6IMI4 303 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 KLHL10Q6JEL2 608 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 Q6ZNX1 250 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 TMC3Q7Z5M5 1100 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 CCNJLQ8IV13 435 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 NELFCDQ8IXH7 590 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 RNF168Q8IYW5 571 aaPredicted RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 MYOCDQ8IZQ8 938 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 FITM2Q8N6M3 262 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 FAM13CQ8NE31 585 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 MDM1Q8TC05 714 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 LPIN2Q92539 896 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 LENG1Q96BZ8 264 aaPredicted RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 SLC7A6OSQ96CW6 309 aaPredicted RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 SNX27Q96L92 541 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 FAM81BQ96LP2 452 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 CATSPER2Q96P56 530 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 RAB3IPQ96QF0 476 aaPredicted RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 ERGIC2Q96RQ1 377 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 ELAC2Q9BQ52 826 aaKnown RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 ADAM19Q9H013 955 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 MTFR1LQ9H019 292 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 CARD9Q9H257 536 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 BHMT2Q9H2M3 363 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 SUV39H2Q9H5I1 410 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 MLXIPQ9HAP2 919 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 LRRC4CQ9HCJ2 640 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 GJB4Q9NTQ9 266 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 EXOC1Q9NV70 894 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 NMRK1Q9NWW6 199 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 TAB2Q9NYJ8 693 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 SMARCAL1Q9NZC9 954 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 TBC1D7Q9P0N9 293 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 HESX1Q9UBX0 185 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNHIT2Q9UHR6 403 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 CNOT7Q9UIV1 285 aaKnown RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 EFR3BQ9Y2G0 817 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 STXBP5LQ9Y2K9 1186 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 THRAP3Q9Y2W1 955 aaKnown RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 ARL2BPQ9Y2Y0 163 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 PCDHA13Q9Y5I0 950 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 EID1Q9Y6B2 187 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 PIK3C2AO00443 1686 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 MON2Q7Z3U7 1717 aa5.71□□□□□ -1.5
LSM3P2-201ENST00000551246 SLIT3O75094 1523 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 SMIM31A0A1B0GVY4 71 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 HTR3EA5X5Y0 456 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 FAM181BA6NEQ2 426 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 TMEM110-MUSTN1A8MSY1 372 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 METTL12A8MUP2 240 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 NVLO15381 856 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 MAGEB2O15479 319 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 POLR2DO15514 142 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 AP1G1O43747 822 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 CEP104O60308 925 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 CTNND1O60716 968 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 AGTP01019 485 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 SHBGP04278 402 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 MMEP08473 750 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 T-ENOLP0DO92 83 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 CHN1P15882 459 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 COL8A1P27658 744 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 VHLP40337 213 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 RFX5P48382 616 aaPredicted RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 PTDSS1P48651 473 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 TRPC1P48995 793 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 ACADVLP49748 655 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 GSK3AP49840 483 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 DNM2P50570 870 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 CDK7P50613 346 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 GUCY2FP51841 1108 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 RPL26P61254 145 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 MGAT5Q09328 741 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 IDI1Q13907 227 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 GRM2Q14416 872 aa5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 FAM133BQ5BKY9 247 aaKnown RBP5.7□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNF362Q5T0B9 420 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms