RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 LILRB3O75022 631 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 DDHD2O94830 711 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 SRFP11831 508 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 RAB27AP51159 221 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 PUM1Q14671 1186 aaKnown RBP eCLIP13.19□□□□□ -0.3
GABPB1-206ENST00000543881 SPECC1Q5M775 1068 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 CMASQ8NFW8 434 aaPredicted RBP13.19□□□□□ -0.3
GABPB1-206ENST00000543881 URGCPQ8TCY9 931 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 ASAP3Q8TDY4 903 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 PIGOQ8TEQ8 1089 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 STAMQ92783 540 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 PGBD4Q96DM1 585 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 WDR6Q9NNW5 1121 aaKnown RBP13.19□□□□□ -0.3
GABPB1-206ENST00000543881 MAN1C1Q9NR34 630 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 ANKEF1Q9NU02 776 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 EPS15L1Q9UBC2 864 aa13.19□□□□□ -0.3
GABPB1-206ENST00000543881 EIF5BO60841 1220 aaKnown RBP13.18□□□□□ -0.3
GABPB1-206ENST00000543881 ALDH2P05091 517 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 DCNP07585 359 aaKnown RBP13.18□□□□□ -0.3
GABPB1-206ENST00000543881 SPATA31C1P0DKV0 1188 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 ATP2B1P20020 1258 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 MCM7P33993 719 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 ARL2P36404 184 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 RARRES1P49788 294 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 PTENP60484 403 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 CAPSQ13938 189 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 ZC3H14Q6PJT7 736 aaKnown RBP13.18□□□□□ -0.3
GABPB1-206ENST00000543881 CYP26C1Q6V0L0 522 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 SMG8Q8ND04 991 aaKnown RBP13.18□□□□□ -0.3
GABPB1-206ENST00000543881 NXPE3Q969Y0 559 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 FAN1Q9Y2M0 1017 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 FANCMQ8IYD8 2048 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 CLUHO75153 1309 aa13.18□□□□□ -0.3
GABPB1-206ENST00000543881 INPPL1O15357 1258 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 TSPAN1O60635 241 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 URODP06132 367 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 SP9P0CG40 484 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 MYBP10242 640 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 GLRA2P23416 452 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 MXD4Q14582 209 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-206ENST00000543881 AMHR2Q16671 573 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 C8orf34Q49A92 452 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 PHLDB3Q6NSJ2 640 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-206ENST00000543881 GPR152Q8TDT2 470 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 RUBCNQ92622 972 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 CPB2Q96IY4 423 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 C8orf76Q96K31 380 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 FAM193BQ96PV7 902 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-206ENST00000543881 MYADMQ96S97 322 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 TMEM175Q9BSA9 504 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 EIF2AQ9BY44 585 aaKnown RBP13.17□□□□□ -0.3
GABPB1-206ENST00000543881 RSAD1Q9HA92 442 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 DLGAP2Q9P1A6 1054 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 SIT1Q9Y3P8 196 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 DOCK8Q8NF50 2099 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 FRYLO94915 3013 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 DNAH14Q0VDD8 3507 aa13.17□□□□□ -0.3
GABPB1-206ENST00000543881 NRP1O14786 923 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 TEX28O15482 410 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 MED24O75448 989 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 DGAT1O75907 488 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 SOD2P04179 222 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 ADH1AP07327 375 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 NCLP19338 710 aaKnown RBP13.16□□□□□ -0.3
GABPB1-206ENST00000543881 MBTD1Q05BQ5 628 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 POU5F1BQ06416 359 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 ZNF174Q15697 407 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 ELMSAN1Q6PJG2 1045 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 TAS1R1Q7RTX1 841 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 CATSPER3Q86XQ3 398 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 C1orf210Q8IVY1 113 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 DCLK2Q8N568 766 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 SMG7Q92540 1137 aaKnown RBP13.16□□□□□ -0.3
GABPB1-206ENST00000543881 RPS6KC1Q96S38 1066 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 LLPHQ9BRT6 129 aaKnown RBP13.16□□□□□ -0.3
GABPB1-206ENST00000543881 RHOBTB2Q9BYZ6 727 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 RNF39Q9H2S5 420 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 GPRC5CQ9NQ84 441 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 DLL3Q9NYJ7 618 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 KANSL3Q9P2N6 904 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 DPP7Q9UHL4 492 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 SSX2IPQ9Y2D8 614 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 HES2Q9Y543 173 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 IPPQ9Y573 584 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 INO80B-WBP1J3KQ70 363 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 B4GALT5O43286 388 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 USO1O60763 962 aaKnown RBP13.16□□□□□ -0.3
GABPB1-206ENST00000543881 RFPL2O75678 378 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 ERLIN2O94905 339 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 GLUD1P00367 558 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 POMCP01189 267 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 XRCC6P12956 609 aaKnown RBP eCLIP13.16□□□□□ -0.3
GABPB1-206ENST00000543881 SAFBQ15424 915 aaKnown RBP eCLIP13.16□□□□□ -0.3
GABPB1-206ENST00000543881 FBXO18Q8NFZ0 1043 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 HERC2P3Q9BVR0 1158 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 POLR3FQ9H1D9 316 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-206ENST00000543881 ARHGEF3Q9NR81 526 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 MIOSQ9NXC5 875 aa13.16□□□□□ -0.3
GABPB1-206ENST00000543881 OTOGLQ3ZCN5 2332 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms