RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 SWAP70Q9UH65 585 aa5.3□□□□□ -1.56
MDM2-226ENST00000540352 CTDP1Q9Y5B0 961 aaPredicted RBP5.3□□□□□ -1.56
MDM2-226ENST00000540352 KDM5DQ9BY66 1539 aa5.3□□□□□ -1.56
MDM2-226ENST00000540352 TDRD9Q8NDG6 1382 aaKnown RBP5.3□□□□□ -1.56
MDM2-226ENST00000540352 IFT140Q96RY7 1462 aa5.3□□□□□ -1.56
MDM2-226ENST00000540352 EVC2Q86UK5 1308 aa5.3□□□□□ -1.56
MDM2-226ENST00000540352 ZNF644Q9H582 1327 aaPredicted RBP5.3□□□□□ -1.56
MDM2-226ENST00000540352 FGD6Q6ZV73 1430 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 H3BQF6 201 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 CREB3O43889 395 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 SHOX2O60902 331 aaPredicted RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 HMMRO75330 724 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 KIAA0754O94854 1291 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 PENKP01210 267 aaPredicted RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 C8BP07358 591 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 VIL1P09327 827 aaKnown RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 ZFXP17010 805 aaPredicted RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 DESP17661 470 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 CYP11B2P19099 503 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 IGFBP6P24592 240 aaPredicted RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 COPB2P35606 906 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 ZNF75DP51815 510 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 AFF3P51826 1226 aaKnown RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 GSDMDP57764 484 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 MPP3Q13368 585 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 TUSC3Q13454 348 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 KRT72Q14CN4 511 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 GPR19Q15760 415 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 TBC1D10BQ4KMP7 808 aaPredicted RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 FNDC3BQ53EP0 1204 aaKnown RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 RNF187Q5TA31 235 aaPredicted RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 TCERG1LQ5VWI1 586 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 ARHGAP36Q6ZRI8 547 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 C16orf86Q6ZW13 317 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 CCDC65Q8IXS2 484 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 TMEFF1Q8IYR6 380 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 GALNT15Q8N3T1 639 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 SYNPOQ8N3V7 929 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 FAM26EQ8N5C1 309 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 SPC24Q8NBT2 197 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 CNNM3Q8NE01 707 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 RUFY1Q96T51 708 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 GORASP1Q9BQQ3 440 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 PAGR1Q9BTK6 254 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 CD244Q9BZW8 370 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 NACA2Q9H009 215 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 NGRNQ9NPE2 291 aaKnown RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 KLC4Q9NSK0 619 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 QPCTLQ9NXS2 382 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 GGA2Q9UJY4 613 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 COQ6Q9Y2Z9 468 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 ZDHHC9Q9Y397 364 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 CD2APQ9Y5K6 639 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 CAPN7Q9Y6W3 813 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 DENND4BO75064 1496 aaPredicted RBP5.29□□□□□ -1.56
MDM2-226ENST00000540352 CCDC141Q6ZP82 1450 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 ITSN2Q9NZM3 1697 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 UHRF1BP1Q6BDS2 1440 aa5.29□□□□□ -1.56
MDM2-226ENST00000540352 GOLGA6L7A0A1B0GV03 622 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 TCRBV16S1A1N1A0A5B0 115 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 TMEM232C9JQI7 657 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 ATP6V1G1O75348 118 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 RNF8O76064 485 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 LUC7L3O95232 432 aaKnown RBP5.28□□□□□ -1.56
MDM2-226ENST00000540352 LTFP02788 710 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 IDO1P14902 403 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 PDE6AP16499 860 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 XBP1P17861 261 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 CFPP27918 469 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 UBE2HP62256 183 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 SMAD4Q13485 552 aaKnown RBP5.28□□□□□ -1.56
MDM2-226ENST00000540352 KCNB1Q14721 858 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 Q4G0T1 1027 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 PLEKHG4Q58EX7 1191 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 AKNAD1Q5T1N1 836 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 MIS18BP1Q6P0N0 1132 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 SARM1Q6SZW1 724 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 KCTD1Q719H9 257 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 C16orf59Q7L2K0 433 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 ARMC9Q7Z3E5 817 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.28□□□□□ -1.56
MDM2-226ENST00000540352 LUZP1Q86V48 1076 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 PTRH1Q86Y79 214 aaKnown RBP5.28□□□□□ -1.56
MDM2-226ENST00000540352 LRRC8AQ8IWT6 810 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 DRC7Q8IY82 874 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 ATP11CQ8NB49 1132 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 AFAP1L1Q8TED9 768 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 CUL5Q93034 780 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 ZBTB8AQ96BR9 441 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 SCLYQ96I15 445 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 CLUHP3Q96NS8 147 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 ANKRD27Q96NW4 1050 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 MAK16Q9BXY0 300 aaKnown RBP5.28□□□□□ -1.56
MDM2-226ENST00000540352 NRDE2Q9H7Z3 1164 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 VIPAS39Q9H9C1 493 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 ACTR5Q9H9F9 607 aaPredicted RBP5.28□□□□□ -1.56
MDM2-226ENST00000540352 PCDH18Q9HCL0 1135 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 TRIM39Q9HCM9 518 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 CD248Q9HCU0 757 aa5.28□□□□□ -1.56
MDM2-226ENST00000540352 PAPOLBQ9NRJ5 636 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms