RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 MIF4GDA9UHW6 222 aaKnown RBP19.33■□□□□ 0.68
GNE-204ENST00000539208 ATG7O95352 703 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 SUPT20HL2P0C7V6 817 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 GOLGA6DP0CG33 693 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 PRPF4BQ13523 1007 aaKnown RBP19.33■□□□□ 0.68
GNE-204ENST00000539208 SUPT20HL1Q3ZLR7 823 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 NOP9Q86U38 636 aaKnown RBP19.33■□□□□ 0.68
GNE-204ENST00000539208 CHST13Q8NET6 341 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 FAM76AQ8TAV0 307 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 POMGNT1Q8WZA1 660 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 RUFY1Q96T51 708 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 RAB20Q9NX57 234 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 GOLGA6AQ9NYA3 693 aa19.33■□□□□ 0.68
GNE-204ENST00000539208 SEPT9Q9UHD8 586 aaPredicted RBP19.33■□□□□ 0.68
GNE-204ENST00000539208 SOX10P56693 466 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 ZSCAN26Q16670 478 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 LEKR1Q6ZMV7 388 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 CD302Q8IX05 232 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 MORC4Q8TE76 937 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 SEC14L1Q92503 715 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 NT5C1BQ96P26 610 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 ZIM3Q96PE6 472 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 RPS6KC1Q96S38 1066 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 PCDHB18PQ96TA0 734 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 SGIP1Q9BQI5 828 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 KIAA1586Q9HCI6 787 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 ALG6Q9Y672 507 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 ZC3H11AO75152 810 aaKnown RBP eCLIP19.32■□□□□ 0.68
GNE-204ENST00000539208 HSPA9P38646 679 aaKnown RBP19.32■□□□□ 0.68
GNE-204ENST00000539208 USP8P40818 1118 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 STXBP2Q15833 593 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 CFAP58Q5T655 872 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 DCAF12L1Q5VU92 463 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.32■□□□□ 0.68
GNE-204ENST00000539208 FAM81BQ96LP2 452 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 DDX47Q9H0S4 455 aaKnown RBP19.32■□□□□ 0.68
GNE-204ENST00000539208 GGA3Q9NZ52 723 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 CTTNBP2NLQ9P2B4 639 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 TELO2Q9Y4R8 837 aa19.32■□□□□ 0.68
GNE-204ENST00000539208 HNRNPDLO14979 420 aaKnown RBP19.31■□□□□ 0.68
GNE-204ENST00000539208 CYP26A1O43174 497 aa19.31■□□□□ 0.68
GNE-204ENST00000539208 FGGP02679 453 aa19.31■□□□□ 0.68
GNE-204ENST00000539208 ITGA4P13612 1032 aa19.31■□□□□ 0.68
GNE-204ENST00000539208 ECHS1P30084 290 aa19.31■□□□□ 0.68
GNE-204ENST00000539208 POU5F1Q01860 360 aaKnown RBP19.31■□□□□ 0.68
GNE-204ENST00000539208 TRADDQ15628 312 aa19.31■□□□□ 0.68
GNE-204ENST00000539208 SV2AQ7L0J3 742 aa19.31■□□□□ 0.68
GNE-204ENST00000539208 ENOSF1Q7L5Y1 443 aa19.31■□□□□ 0.68
GNE-204ENST00000539208 TAS1R3Q7RTX0 852 aa19.31■□□□□ 0.68
GNE-204ENST00000539208 CCDC125Q86Z20 511 aa19.31■□□□□ 0.68
GNE-204ENST00000539208 POP1Q99575 1024 aaKnown RBP19.31■□□□□ 0.68
GNE-204ENST00000539208 POLR3FQ9H1D9 316 aaPredicted RBP19.31■□□□□ 0.68
GNE-204ENST00000539208 MAFBQ9Y5Q3 323 aaPredicted RBP19.31■□□□□ 0.68
GNE-204ENST00000539208 LCTP09848 1927 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 KIAA0391O15091 583 aaKnown RBP19.3■□□□□ 0.68
GNE-204ENST00000539208 CLDN10P78369 228 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.3■□□□□ 0.68
GNE-204ENST00000539208 C1orf131Q8NDD1 294 aaKnown RBP19.3■□□□□ 0.68
GNE-204ENST00000539208 TAS1R2Q8TE23 839 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 RNPC3Q96LT9 517 aaKnown RBP19.3■□□□□ 0.68
GNE-204ENST00000539208 PLEKHA4Q9H4M7 779 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 STYXL1Q9Y6J8 313 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 WDR90Q96KV7 1748 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 SHOX2O60902 331 aaPredicted RBP19.3■□□□□ 0.68
GNE-204ENST00000539208 CYP11B1P15538 503 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 FMO1Q01740 532 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 CDR2Q01850 454 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 SP2Q02086 613 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 GCNT1Q02742 428 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 SLC47A2Q86VL8 602 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 PIK3R5Q8WYR1 880 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 DOCK5Q9H7D0 1870 aa19.3■□□□□ 0.68
GNE-204ENST00000539208 ZNF233A6NK53 670 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 EXTL3O43909 919 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 CYP1A2P05177 515 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 GUCY2FP51841 1108 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 PTENP60484 403 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 C15orf39Q6ZRI6 1047 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 GPC2Q8N158 579 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 UBL4BQ8N7F7 174 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 AMACRQ9UHK6 382 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 USP2O75604 605 aaPredicted RBP19.29■□□□□ 0.68
GNE-204ENST00000539208 IVLP07476 585 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 HIRAP54198 1017 aaPredicted RBP19.29■□□□□ 0.68
GNE-204ENST00000539208 EMC2Q15006 297 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 ALG3Q92685 438 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 BICD1Q96G01 975 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 ZNF302Q9NR11 478 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 TOPORSQ9NS56 1045 aaPredicted RBP19.29■□□□□ 0.68
GNE-204ENST00000539208 SYNGAP1Q96PV0 1343 aa19.29■□□□□ 0.68
GNE-204ENST00000539208 IGKV6D-21A0A0A0MT36 114 aa19.28■□□□□ 0.68
GNE-204ENST00000539208 MMEP08473 750 aa19.28■□□□□ 0.68
GNE-204ENST00000539208 HSPA6P17066 643 aa19.28■□□□□ 0.68
GNE-204ENST00000539208 ATP4AP20648 1035 aa19.28■□□□□ 0.68
GNE-204ENST00000539208 PDE6CP51160 858 aa19.28■□□□□ 0.68
GNE-204ENST00000539208 SP4Q02446 784 aa19.28■□□□□ 0.68
GNE-204ENST00000539208 MTERF2Q49AM1 385 aa19.28■□□□□ 0.68
GNE-204ENST00000539208 DDX1Q92499 740 aaKnown RBP19.28■□□□□ 0.68
GNE-204ENST00000539208 FAM213AQ9BRX8 229 aa19.28■□□□□ 0.68
GNE-204ENST00000539208 NIFKQ9BYG3 293 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms