RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ZC3H14Q6PJT7 736 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 POTEGQ6S5H5 508 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 EXOC8Q8IYI6 725 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 DAGLBQ8NCG7 672 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 TCP11Q8WWU5 503 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 NXPE3Q969Y0 559 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 LARP6Q9BRS8 491 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 COLEC11Q9BWP8 271 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 GPR62Q9BZJ7 368 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 FOXQ1Q9C009 403 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 TRIM6Q9C030 488 aaPredicted RBP15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 NXF3Q9H4D5 531 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 PLEKHA4Q9H4M7 779 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 KCNMB3Q9NPA1 279 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 RGL1Q9NZL6 768 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 KCNJ14Q9UNX9 436 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 GPR179Q6PRD1 2367 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 ANHXE9PGG2 379 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 ZBTB39O15060 712 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 LRRN2O75325 713 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 PSMA5P28066 241 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 CYP4A11Q02928 519 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 NCAPH2Q6IBW4 605 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 PHLDB3Q6NSJ2 640 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 FUT10Q6P4F1 479 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 KRT25Q7Z3Z0 450 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 C1orf210Q8IVY1 113 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 PJA1Q8NG27 643 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 HDAC7Q8WUI4 952 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 FAM20AQ96MK3 541 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 MTRQ99707 1265 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 PRKD2Q9BZL6 878 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 CSRNP2Q9H175 543 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 CHST7Q9NS84 486 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 ZDHHC7Q9NXF8 308 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 DLGAP2Q9P1A6 1054 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 CACNG4Q9UBN1 327 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 PPME1Q9Y570 386 aa15.6■□□□□ 0.09
SMARCA4-206ENST00000538456 CCDC194A0A1B0GVG4 234 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 POTEMA6NI47 508 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 ASAP2O43150 1006 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 MARCH6O60337 910 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 GLULP15104 373 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 AKAP5P24588 427 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 AXLP30530 894 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 EVCP57679 992 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 NCBP1Q09161 790 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 STK3Q13188 491 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 TOB2Q14106 344 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 CTTNQ14247 550 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 USP41Q3LFD5 358 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 OTUD6AQ7L8S5 288 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 CDR2LQ86X02 465 aaPredicted RBP15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 C4orf19Q8IY42 314 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 DCLK2Q8N568 766 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 CCDC51Q96ER9 411 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 DYDC2Q96IM9 177 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 RPP25Q9BUL9 199 aaKnown RBP15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 SLC2A4RGQ9NR83 387 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 KLK14Q9P0G3 267 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 ADAM28Q9UKQ2 775 aa15.59■□□□□ 0.09
SMARCA4-206ENST00000538456 B4GALT5O43286 388 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 CCNT1O60563 726 aaKnown RBP15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 FSHRP23945 695 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 PTENP60484 403 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 GPC5P78333 572 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 NTHL1P78549 312 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 MBTD1Q05BQ5 628 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 TFDP1Q14186 410 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 MXD4Q14582 209 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 EPHA7Q15375 998 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 GALNT17Q6IS24 598 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 LILRA6Q6PI73 481 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 PRSS55Q6UWB4 352 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 PARM1Q6UWI2 310 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 GRASPQ7Z6J2 395 aaPredicted RBP15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 NEK8Q86SG6 692 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 POTEDQ86YR6 584 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 HACE1Q8IYU2 909 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 HASPINQ8TF76 798 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 RUBCNQ92622 972 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 HAS1Q92839 578 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 FGF14Q92915 247 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 XPNPEP1Q9NQW7 623 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 FNIP2Q9P278 1114 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 GIT1Q9Y2X7 761 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 PATJQ8NI35 1801 aa15.58■□□□□ 0.08
SMARCA4-206ENST00000538456 ZMYND10O75800 440 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 PAPLNO95428 1278 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 NPTXRO95502 500 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 GCFC2P16383 781 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 ARF4P18085 180 aaPredicted RBP15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 CREMQ03060 361 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 SNW1Q13573 536 aaKnown RBP15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 CAPSQ13938 189 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 PUM1Q14671 1186 aaKnown RBP eCLIP15.57■□□□□ 0.082e-26■■□□□ 11.5
SMARCA4-206ENST00000538456 PCBP1Q15365 356 aaKnown RBP eCLIP15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 AMHR2Q16671 573 aa15.57■□□□□ 0.08
SMARCA4-206ENST00000538456 RTP2Q5QGT7 225 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms