RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 LRRC57Q8N9N7 239 aa27.97■■■□□ 2.07
COL13A1-214ENST00000522165 HNRNPLLQ8WVV9 542 aaKnown RBP27.97■■■□□ 2.07
COL13A1-214ENST00000522165 RAB20Q9NX57 234 aa27.97■■■□□ 2.07
COL13A1-214ENST00000522165 AGO2Q9UKV8 859 aaKnown RBP27.97■■■□□ 2.07
COL13A1-214ENST00000522165 SLC45A1Q9Y2W3 748 aa27.97■■■□□ 2.07
COL13A1-214ENST00000522165 ATP8B1O43520 1251 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 ADCY3O60266 1144 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 MFAP3P55082 362 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 CCNA1P78396 465 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 DRP2Q13474 957 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 FAM71AQ8IYT1 594 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 TPCN2Q8NHX9 752 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 HELQQ8TDG4 1101 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 ATP8B4Q8TF62 1192 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 COPS5Q92905 334 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 HAPLN2Q9GZV7 340 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.96■■■□□ 2.07
COL13A1-214ENST00000522165 TXNP10599 105 aaKnown RBP27.96■■■□□ 2.07
COL13A1-214ENST00000522165 VSNL1P62760 191 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 CLDN10P78369 228 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 C2orf54Q08AI8 447 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 PSMD6Q15008 389 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 SLC20A1Q8WUM9 679 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 PRPF31Q8WWY3 499 aaKnown RBP27.96■■■□□ 2.07
COL13A1-214ENST00000522165 SHC3Q92529 594 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 TARS2Q9BW92 718 aaKnown RBP27.96■■■□□ 2.07
COL13A1-214ENST00000522165 PDGFCQ9NRA1 345 aa27.96■■■□□ 2.07
COL13A1-214ENST00000522165 ZBTB42B2RXF5 422 aa27.95■■■□□ 2.07
COL13A1-214ENST00000522165 TMEM253P0C7T8 217 aa27.95■■■□□ 2.07
COL13A1-214ENST00000522165 GTF2A2P52657 109 aa27.95■■■□□ 2.07
COL13A1-214ENST00000522165 NLRP11P59045 1033 aaKnown RBP27.95■■■□□ 2.07
COL13A1-214ENST00000522165 CBX1P83916 185 aa27.95■■■□□ 2.07
COL13A1-214ENST00000522165 TTLL4Q14679 1199 aa27.95■■■□□ 2.07
COL13A1-214ENST00000522165 CCDC181Q5TID7 509 aa27.95■■■□□ 2.07
COL13A1-214ENST00000522165 IER5Q5VY09 327 aa27.95■■■□□ 2.07
COL13A1-214ENST00000522165 WDR93Q6P2C0 686 aa27.95■■■□□ 2.07
COL13A1-214ENST00000522165 C15orf39Q6ZRI6 1047 aa27.95■■■□□ 2.07
COL13A1-214ENST00000522165 ZBTB45Q96K62 511 aaPredicted RBP27.95■■■□□ 2.07
COL13A1-214ENST00000522165 NT5C1BQ96P26 610 aa27.95■■■□□ 2.07
COL13A1-214ENST00000522165 NCANO14594 1321 aa27.95■■■□□ 2.06
COL13A1-214ENST00000522165 TMCO5BA8MYB1 307 aa27.95■■■□□ 2.06
COL13A1-214ENST00000522165 BTBD19C9JJ37 291 aa27.95■■■□□ 2.06
COL13A1-214ENST00000522165 EDN1P05305 212 aa27.95■■■□□ 2.06
COL13A1-214ENST00000522165 PLCB4Q15147 1175 aa27.95■■■□□ 2.06
COL13A1-214ENST00000522165 TMEM63BQ5T3F8 832 aa27.95■■■□□ 2.06
COL13A1-214ENST00000522165 ARMCX2Q7L311 632 aa27.95■■■□□ 2.06
COL13A1-214ENST00000522165 PALB2Q86YC2 1186 aa27.95■■■□□ 2.06
COL13A1-214ENST00000522165 RNF14Q9UBS8 474 aa27.95■■■□□ 2.06
COL13A1-214ENST00000522165 CCL15-CCL14A0A0B4J2E2 113 aa27.94■■■□□ 2.06
COL13A1-214ENST00000522165 TBC1D8O95759 1140 aa27.94■■■□□ 2.06
COL13A1-214ENST00000522165 PRPF4BQ13523 1007 aaKnown RBP27.94■■■□□ 2.06
COL13A1-214ENST00000522165 CCL15Q16663 113 aa27.94■■■□□ 2.06
COL13A1-214ENST00000522165 CRELD2Q6UXH1 353 aaPredicted RBP27.94■■■□□ 2.06
COL13A1-214ENST00000522165 MMGT1Q8N4V1 131 aa27.94■■■□□ 2.06
COL13A1-214ENST00000522165 SPATA4Q8NEY3 305 aa27.94■■■□□ 2.06
COL13A1-214ENST00000522165 SCFD2Q8WU76 684 aa27.94■■■□□ 2.06
COL13A1-214ENST00000522165 ZNF516Q92618 1163 aa27.94■■■□□ 2.06
COL13A1-214ENST00000522165 SEPT11Q9NVA2 429 aaKnown RBP27.94■■■□□ 2.06
COL13A1-214ENST00000522165 PACSIN2Q9UNF0 486 aaPredicted RBP27.94■■■□□ 2.06
COL13A1-214ENST00000522165 TARSL2A2RTX5 802 aaKnown RBP27.93■■■□□ 2.06
COL13A1-214ENST00000522165 GAS2O43903 313 aaKnown RBP27.93■■■□□ 2.06
COL13A1-214ENST00000522165 USP8P40818 1118 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 PAFAH1B1P43034 410 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 MKRN4PQ13434 485 aaPredicted RBP27.93■■■□□ 2.06
COL13A1-214ENST00000522165 LONRF2Q1L5Z9 754 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 ZNF792Q3KQV3 632 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 EXOC8Q8IYI6 725 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 RNF216Q9NWF9 866 aaPredicted RBP27.93■■■□□ 2.06
COL13A1-214ENST00000522165 TAS2R14Q9NYV8 317 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 EHD2Q9NZN4 543 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 DIS3Q9Y2L1 958 aaKnown RBP27.93■■■□□ 2.06
COL13A1-214ENST00000522165 A0A0B4J269 797 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 IGKV6-21A0A0C4DH24 114 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 ERLIN1O75477 346 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 ACOT2P49753 483 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 LMBR1Q8WVP7 490 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 TCP11Q8WWU5 503 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 BRI3BPQ8WY22 251 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 SMARCAL1Q9NZC9 954 aa27.93■■■□□ 2.06
COL13A1-214ENST00000522165 LDHAP00338 332 aaKnown RBP27.92■■■□□ 2.06
COL13A1-214ENST00000522165 SLC26A2P50443 739 aa27.92■■■□□ 2.06
COL13A1-214ENST00000522165 MKRN3Q13064 507 aaKnown RBP27.92■■■□□ 2.06
COL13A1-214ENST00000522165 SLFN11Q7Z7L1 901 aa27.92■■■□□ 2.06
COL13A1-214ENST00000522165 CTNNBL1Q8WYA6 563 aaPredicted RBP27.92■■■□□ 2.06
COL13A1-214ENST00000522165 RFFLQ8WZ73 363 aa27.92■■■□□ 2.06
COL13A1-214ENST00000522165 FNBP1Q96RU3 617 aa27.92■■■□□ 2.06
COL13A1-214ENST00000522165 MSTO1Q9BUK6 570 aa27.92■■■□□ 2.06
COL13A1-214ENST00000522165 SMARCAD1Q9H4L7 1026 aa27.92■■■□□ 2.06
COL13A1-214ENST00000522165 SUGCTQ9HAC7 445 aa27.92■■■□□ 2.06
COL13A1-214ENST00000522165 NOCTQ9UK39 431 aaKnown RBP27.92■■■□□ 2.06
COL13A1-214ENST00000522165 SGPL1O95470 568 aa27.91■■■□□ 2.06
COL13A1-214ENST00000522165 ADORA2AP29274 412 aa27.91■■■□□ 2.06
COL13A1-214ENST00000522165 EFNA5P52803 228 aa27.91■■■□□ 2.06
COL13A1-214ENST00000522165 WNT7BP56706 349 aa27.91■■■□□ 2.06
COL13A1-214ENST00000522165 RPS6KA1Q15418 735 aa27.91■■■□□ 2.06
COL13A1-214ENST00000522165 CFAP221Q4G0U5 840 aa27.91■■■□□ 2.06
COL13A1-214ENST00000522165 BEND6Q5SZJ8 279 aaPredicted RBP27.91■■■□□ 2.06
COL13A1-214ENST00000522165 RPUSD2Q8IZ73 545 aaKnown RBP27.91■■■□□ 2.06
COL13A1-214ENST00000522165 KRT222Q8N1A0 295 aa27.91■■■□□ 2.06
COL13A1-214ENST00000522165 EPS8L1Q8TE68 723 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms