RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 VPS37CA5D8V6 355 aaPredicted RBP25.4■■□□□ 1.66
CLDND1-230ENST00000514537 NPTX2P47972 431 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 PEX3P56589 373 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 MAPK7Q13164 816 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 TMEM132AQ24JP5 1023 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 SYCE2Q6PIF2 218 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 SYT2Q8N9I0 419 aaPredicted RBP25.4■■□□□ 1.66
CLDND1-230ENST00000514537 CASP10Q92851 521 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 TIPINQ9BVW5 301 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 C1QTNF1Q9BXJ1 281 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 S1PR5Q9H228 398 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 KLK14Q9P0G3 267 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 DAXXQ9UER7 740 aaPredicted RBP25.4■■□□□ 1.66
CLDND1-230ENST00000514537 HCFC2Q9Y5Z7 792 aa25.4■■□□□ 1.66
CLDND1-230ENST00000514537 CCDC169A6NNP5 214 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 PI4K2BG5E9Z4 385 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 K7ERI5 159 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 SLC26A4O43511 780 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 GUCY2CP25092 1073 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 CA8P35219 290 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 OR1G1P47890 313 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 SF3A1Q15459 793 aaKnown RBP25.39■■□□□ 1.66
CLDND1-230ENST00000514537 TMEM119Q4V9L6 283 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 NT5DC1Q5TFE4 455 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 EEF1DP3Q658K8 133 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 SUSD6Q92537 303 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 DRC1Q96MC2 740 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 PLIN2Q99541 437 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 POP1Q99575 1024 aaKnown RBP25.39■■□□□ 1.66
CLDND1-230ENST00000514537 ADPGKQ9BRR6 497 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 C17orf75Q9HAS0 396 aa25.39■■□□□ 1.66
CLDND1-230ENST00000514537 PRG3Q9Y2Y8 225 aaPredicted RBP25.39■■□□□ 1.66
CLDND1-230ENST00000514537 EFEMP2O95967 443 aa25.38■■□□□ 1.65
CLDND1-230ENST00000514537 HOXB8P17481 243 aaPredicted RBP25.38■■□□□ 1.65
CLDND1-230ENST00000514537 SYT1P21579 422 aa25.38■■□□□ 1.65
CLDND1-230ENST00000514537 SLC12A3P55017 1021 aa25.38■■□□□ 1.65
CLDND1-230ENST00000514537 GRIK3Q13003 919 aa25.38■■□□□ 1.65
CLDND1-230ENST00000514537 DMP1Q13316 513 aaPredicted RBP25.38■■□□□ 1.65
CLDND1-230ENST00000514537 PTPN14Q15678 1187 aa25.38■■□□□ 1.65
CLDND1-230ENST00000514537 CABP7Q86V35 215 aa25.38■■□□□ 1.65
CLDND1-230ENST00000514537 CDK5RAP3Q96JB5 506 aa25.38■■□□□ 1.65
CLDND1-230ENST00000514537 TMEM134Q9H6X4 195 aa25.38■■□□□ 1.65
CLDND1-230ENST00000514537 SNTG2Q9NY99 539 aa25.38■■□□□ 1.65
CLDND1-230ENST00000514537 ARHGAP28Q9P2N2 729 aa25.38■■□□□ 1.65
CLDND1-230ENST00000514537 LILRB3O75022 631 aa25.37■■□□□ 1.65
CLDND1-230ENST00000514537 NR1I2O75469 434 aa25.37■■□□□ 1.65
CLDND1-230ENST00000514537 SOD2P04179 222 aa25.37■■□□□ 1.65
CLDND1-230ENST00000514537 RNF168Q8IYW5 571 aaPredicted RBP25.37■■□□□ 1.65
CLDND1-230ENST00000514537 TMEM87AQ8NBN3 555 aa25.37■■□□□ 1.65
CLDND1-230ENST00000514537 NTPCRQ9BSD7 190 aaKnown RBP25.37■■□□□ 1.65
CLDND1-230ENST00000514537 RBM19Q9Y4C8 960 aaKnown RBP25.37■■□□□ 1.65
CLDND1-230ENST00000514537 SFI1A8K8P3 1242 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 K7ELQ4 463 aaPredicted RBP25.36■■□□□ 1.65
CLDND1-230ENST00000514537 SSBP05455 408 aaKnown RBP eCLIP25.36■■□□□ 1.65
CLDND1-230ENST00000514537 PLA2G4BP0C869 781 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 LONP1P36776 959 aaKnown RBP25.36■■□□□ 1.65
CLDND1-230ENST00000514537 DCAF4L1Q3SXM0 396 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 ATF7IP2Q5U623 682 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 TAS1R3Q7RTX0 852 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 SLC22A17Q8WUG5 538 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 RPS6KC1Q96S38 1066 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 COLEC11Q9BWP8 271 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 KMT5AQ9NQR1 393 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 KCND2Q9NZV8 630 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 TNFSF13BQ9Y275 285 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 PHLPP2Q6ZVD8 1323 aa25.36■■□□□ 1.65
CLDND1-230ENST00000514537 RECQL4O94761 1208 aa25.35■■□□□ 1.65
CLDND1-230ENST00000514537 UBA7P41226 1012 aa25.35■■□□□ 1.65
CLDND1-230ENST00000514537 GRIN1Q05586 938 aa25.35■■□□□ 1.65
CLDND1-230ENST00000514537 TAS1R1Q7RTX1 841 aa25.35■■□□□ 1.65
CLDND1-230ENST00000514537 HERC2P3Q9BVR0 1158 aa25.35■■□□□ 1.65
CLDND1-230ENST00000514537 PHF7Q9BWX1 381 aaPredicted RBP25.35■■□□□ 1.65
CLDND1-230ENST00000514537 MRPL17Q9NRX2 175 aaKnown RBP25.35■■□□□ 1.65
CLDND1-230ENST00000514537 KCNG1Q9UIX4 513 aa25.35■■□□□ 1.65
CLDND1-230ENST00000514537 F8W810 466 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 PTGESO14684 152 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 RESTQ13127 1097 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 TPRNQ4KMQ1 711 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 PPFIBP1Q86W92 1011 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 SPIRE2Q8WWL2 714 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 CALML4Q96GE6 196 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 KLHL5Q96PQ7 755 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 ACO2Q99798 780 aaKnown RBP25.34■■□□□ 1.65
CLDND1-230ENST00000514537 APOL5Q9BWW9 433 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 EMILIN2Q9BXX0 1053 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 CXCL16Q9H2A7 254 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 PTPRHQ9HD43 1115 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 CLIC4Q9Y696 253 aa25.34■■□□□ 1.65
CLDND1-230ENST00000514537 LOC730098B7Z3J9 87 aa25.33■■□□□ 1.65
CLDND1-230ENST00000514537 CNPP09543 421 aaKnown RBP25.33■■□□□ 1.65
CLDND1-230ENST00000514537 ALADP13716 330 aa25.33■■□□□ 1.65
CLDND1-230ENST00000514537 PLS3P13797 630 aa25.33■■□□□ 1.65
CLDND1-230ENST00000514537 EPCAMP16422 314 aa25.33■■□□□ 1.65
CLDND1-230ENST00000514537 RAD51AP2Q09MP3 1159 aa25.33■■□□□ 1.65
CLDND1-230ENST00000514537 TUSC3Q13454 348 aa25.33■■□□□ 1.65
CLDND1-230ENST00000514537 CBX2Q14781 532 aaPredicted RBP25.33■■□□□ 1.65
CLDND1-230ENST00000514537 PTPAQ15257 358 aa25.33■■□□□ 1.65
CLDND1-230ENST00000514537 ARSHQ5FYA8 562 aa25.33■■□□□ 1.65
CLDND1-230ENST00000514537 APBB1IPQ7Z5R6 666 aaPredicted RBP25.33■■□□□ 1.65
CLDND1-230ENST00000514537 MRPL4Q9BYD3 311 aaKnown RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms