RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 BPIFB4P59827 614 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 RHDQ02161 417 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 SAFBQ15424 915 aaKnown RBP eCLIP5.52□□□□□ -1.53
NIPBL-207ENST00000513819 KCNA10Q16322 511 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 CCDC157Q569K6 752 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 FAM26FQ5R3K3 315 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 NPNTQ6UXI9 565 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 CCDC149Q6ZUS6 474 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 USP30Q70CQ3 517 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 TTC7BQ86TV6 843 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 ZNF761Q86XN6 746 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-207ENST00000513819 COL23A1Q86Y22 540 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-207ENST00000513819 ZGPATQ8N5A5 531 aaKnown RBP5.52□□□□□ -1.53
NIPBL-207ENST00000513819 LILRA3Q8N6C8 439 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-207ENST00000513819 TP53I13Q8NBR0 393 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-207ENST00000513819 REPS2Q8NFH8 660 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 NSUN6Q8TEA1 469 aaKnown RBP5.52□□□□□ -1.53
NIPBL-207ENST00000513819 PMM1Q92871 262 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 SLC7A6OSQ96CW6 309 aaPredicted RBP5.52□□□□□ -1.53
NIPBL-207ENST00000513819 MBD6Q96DN6 1003 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 MANSC1Q9H8J5 431 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 KMT5AQ9NQR1 393 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 DDX21Q9NR30 783 aaKnown RBP eCLIP5.52□□□□□ -1.53
NIPBL-207ENST00000513819 GPRC5DQ9NZD1 345 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 STXBP5LQ9Y2K9 1186 aa5.52□□□□□ -1.53
NIPBL-207ENST00000513819 FAM227AF5H4B4 570 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 ITGA10O75578 1167 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 TSPAN15O95858 294 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 ZBED1O96006 694 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 NEK3P51956 506 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 CDC42EP1Q00587 391 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 ZMAT1Q5H9K5 638 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 KRT40Q6A162 431 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 OGFOD2Q6N063 350 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 SRGAP1Q7Z6B7 1085 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 RALYLQ86SE5 291 aaKnown RBP5.51□□□□□ -1.53
NIPBL-207ENST00000513819 RSPH3Q86UC2 560 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 ANKRD53Q8N9V6 530 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 OR7D4Q8NG98 312 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 KLHDC4Q8TBB5 520 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 STON2Q8WXE9 905 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 LPPQ93052 612 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 TMX3Q96JJ7 454 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 LCORQ96JN0 433 aaPredicted RBP5.51□□□□□ -1.53
NIPBL-207ENST00000513819 RPL10LQ96L21 214 aaKnown RBP5.51□□□□□ -1.53
NIPBL-207ENST00000513819 DMRTA2Q96SC8 542 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 MPHOSPH6Q99547 160 aaKnown RBP5.51□□□□□ -1.53
NIPBL-207ENST00000513819 TMEM60Q9H2L4 133 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 ARMT1Q9H993 441 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 BCO1Q9HAY6 547 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 USP25Q9UHP3 1055 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 RNF114Q9Y508 228 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 PCDHGB6Q9Y5F9 930 aa5.51□□□□□ -1.53
NIPBL-207ENST00000513819 ARID4BQ4LE39 1312 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-207ENST00000513819 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 WNT10BO00744 389 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 PMM2O15305 246 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 SGTAO43765 313 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 AMY1AP04745 511 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 RPLP2P05387 115 aaKnown RBP5.5□□□□□ -1.53
NIPBL-207ENST00000513819 VSIG10L2P0DP72 767 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 ADCY7P51828 1080 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 WNT3AP56704 352 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 HGFACQ04756 655 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 DUSP2Q05923 314 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 NOGQ13253 232 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 HDAC1Q13547 482 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-207ENST00000513819 KIAA0753Q2KHM9 967 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 RNF151Q2KHN1 245 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 KHDC1Q4VXA5 237 aaKnown RBP5.5□□□□□ -1.53
NIPBL-207ENST00000513819 GJC2Q5T442 439 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-207ENST00000513819 DAAM2Q86T65 1068 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 KRTAP19-1Q8IUB9 90 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 KBTBD2Q8IY47 623 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 TRMT2AQ8IZ69 625 aaKnown RBP5.5□□□□□ -1.53
NIPBL-207ENST00000513819 KIAA0319LQ8IZA0 1049 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 FAM43AQ8N2R8 423 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 LINC01356Q8N9X3 169 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 SVIPQ8NHG7 77 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 PLBD2Q8NHP8 589 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 MDM1Q8TC05 714 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 SLC39A13Q96H72 371 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 MRGPRX4Q96LA9 322 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 RPS6KC1Q96S38 1066 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 VRK1Q99986 396 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-207ENST00000513819 SENP6Q9GZR1 1112 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-207ENST00000513819 SLC6A15Q9H2J7 730 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 LANCL2Q9NS86 450 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 NCDNQ9UBB6 729 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 AJAP1Q9UKB5 411 aaPredicted RBP5.5□□□□□ -1.53
NIPBL-207ENST00000513819 PCDHA3Q9Y5H8 950 aa5.5□□□□□ -1.53
NIPBL-207ENST00000513819 MYBBP1AQ9BQG0 1328 aaKnown RBP5.49□□□□□ -1.53
NIPBL-207ENST00000513819 MROH6A6NGR9 719 aa5.49□□□□□ -1.53
NIPBL-207ENST00000513819 SLC16A6O15403 523 aa5.49□□□□□ -1.53
NIPBL-207ENST00000513819 ARHGAP6O43182 974 aa5.49□□□□□ -1.53
NIPBL-207ENST00000513819 JUNP05412 331 aaKnown RBP5.49□□□□□ -1.53
NIPBL-207ENST00000513819 MYL3P08590 195 aa5.49□□□□□ -1.53
NIPBL-207ENST00000513819 GYPEP15421 78 aa5.49□□□□□ -1.53
NIPBL-207ENST00000513819 CRHR1P34998 444 aa5.49□□□□□ -1.53
NIPBL-207ENST00000513819 PTPN7P35236 360 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms