RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 TSHZ1Q6ZSZ6 1077 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 SPRED1Q7Z699 444 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 AUTS2Q8WXX7 1259 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 SORCS2Q96PQ0 1159 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 TCF25Q9BQ70 676 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 PLA2G12BQ9BX93 195 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 AURKAIP1Q9NWT8 199 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 SLC5A4Q9NY91 659 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 ST6GALNAC2Q9UJ37 374 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 MAGEL2Q9UJ55 1249 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 LRRC9Q6ZRR7 1453 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 TROQ12816 1431 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 CCNB3Q8WWL7 1395 aa5.55□□□□□ -1.52
HMGB3P13-201ENST00000511263 DYNC1I1O14576 645 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 MUSKO15146 869 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 IPO13O94829 963 aaKnown RBP5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 TOX4O94842 621 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 SEC24DO94855 1032 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 CFBP00751 764 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 C6P13671 934 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 PRKD1Q15139 912 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 TBR1Q16650 682 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 EXOC8Q8IYI6 725 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 CMTM4Q8IZR5 234 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 Q8N1X5 172 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 MNS1Q8NEH6 495 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 DNERQ8NFT8 737 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 PPP1R14CQ8TAE6 165 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 EDAQ92838 391 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 GNRHR2Q96P88 292 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 MYCBPQ99417 103 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 TOPORSQ9NS56 1045 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 PLA2G3Q9NZ20 509 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 CLCA2Q9UQC9 943 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 SH3BP1Q9Y3L3 701 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 CDY2AQ9Y6F7 541 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 NINLQ9Y2I6 1382 aa5.54□□□□□ -1.52
HMGB3P13-201ENST00000511263 ABCC2Q92887 1545 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 C2orf78A6NCI8 922 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 OVOL3O00110 214 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 KIF1CO43896 1103 aaKnown RBP5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 MFAP3LO75121 409 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 ALDH1A2O94788 518 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 SLPIP03973 132 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 GAAP10253 952 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 GYPEP15421 78 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 ZSCAN20P17040 1043 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 DUSP2Q05923 314 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 MGAT5Q09328 741 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 PDZD4Q76G19 769 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 TAS1R1Q7RTX1 841 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 SGMS1Q86VZ5 419 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 DDX42Q86XP3 938 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 GSPT2Q8IYD1 628 aaKnown RBP5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 THEMISQ8N1K5 641 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 D2HGDHQ8N465 521 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 CFHR4Q92496 578 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 FATE1Q969F0 183 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 RPL10LQ96L21 214 aaKnown RBP5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 PAIP2Q9BPZ3 127 aaKnown RBP5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 KLC2Q9H0B6 622 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 EPC1Q9H2F5 836 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 KCTD10Q9H3F6 313 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 IL23AQ9NPF7 189 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 NCDNQ9UBB6 729 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 FEZ2Q9UHY8 353 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 TESMINQ9Y4I5 508 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 CEP83Q9Y592 693 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 MRFAP1Q9Y605 127 aa5.53□□□□□ -1.52
HMGB3P13-201ENST00000511263 KIAA0556O60303 1618 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 ABCA8O94911 1581 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 K7ESF4 209 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 LY86O95711 162 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 GASTP01350 101 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 LTA4HP09960 611 aaKnown RBP5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 CLEC2LP0C7M8 214 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 NEFHP12036 1026 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 HNRNPLP14866 589 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 LGALS4P56470 323 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 SCAND1P57086 179 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 CDSNQ15517 529 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 C19orf54Q5BKX5 351 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 CT83Q5H943 113 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 PITRM1Q5JRX3 1037 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 FAM111BQ6SJ93 734 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 CREBRFQ8IUR6 639 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 FUKQ8N0W3 1084 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 TMTC2Q8N394 836 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 Q8TCH9 128 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 SH3RF3Q8TEJ3 882 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 LMBR1Q8WVP7 490 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 EAF2Q96CJ1 260 aaPredicted RBP5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 FAM210AQ96ND0 272 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 PTPN18Q99952 460 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 C14orf119Q9NWQ9 140 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 KIF3AQ9Y496 699 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 COL4A3BPQ9Y5P4 624 aa5.52□□□□□ -1.53
HMGB3P13-201ENST00000511263 NUP153P49790 1475 aaKnown RBP5.51□□□□□ -1.53
HMGB3P13-201ENST00000511263 PLCH2O75038 1416 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms