RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 GIT1Q9Y2X7 761 aa17.51■□□□□ 0.39
SSBP1-214ENST00000498107 CARNS1A5YM72 827 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 TBKBP1A7MCY6 615 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 SOX1O00570 391 aaPredicted RBP17.5■□□□□ 0.39
SSBP1-214ENST00000498107 KIF20AO95235 890 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 FGFR1P11362 822 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 MYOGP15173 224 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 FXR1P51114 621 aaKnown RBP eCLIP17.5■□□□□ 0.39
SSBP1-214ENST00000498107 KCNB1Q14721 858 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 NOLC1Q14978 699 aaKnown RBP eCLIP17.5■□□□□ 0.39
SSBP1-214ENST00000498107 KMT5BQ4FZB7 885 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 ZNF697Q5TEC3 545 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 LRRC43Q8N309 656 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 URGCPQ8TCY9 931 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 CCDC94Q9BW85 323 aaPredicted RBP17.5■□□□□ 0.39
SSBP1-214ENST00000498107 KANSL3Q9P2N6 904 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 ANKFY1Q9P2R3 1169 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 USP20Q9Y2K6 914 aa17.5■□□□□ 0.39
SSBP1-214ENST00000498107 RHOBTB3O94955 611 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 PRR29P0C7W0 189 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 MYBP10242 640 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 YARSP54577 528 aaKnown RBP17.49■□□□□ 0.39
SSBP1-214ENST00000498107 MCL1Q07820 350 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 AGMOQ6ZNB7 445 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 ZNF507Q8TCN5 953 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 HELQQ8TDG4 1101 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 LPPQ93052 612 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 LRCH3Q96II8 777 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 GSDMAQ96QA5 445 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 TGS1Q96RS0 853 aaKnown RBP17.49■□□□□ 0.39
SSBP1-214ENST00000498107 APOL6Q9BWW8 343 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 CDT1Q9H211 546 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 NXF3Q9H4D5 531 aaKnown RBP17.49■□□□□ 0.39
SSBP1-214ENST00000498107 AAASQ9NRG9 546 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 TOPORSQ9NS56 1045 aaPredicted RBP17.49■□□□□ 0.39
SSBP1-214ENST00000498107 LMBRD1Q9NUN5 540 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 PARP2Q9UGN5 583 aa17.49■□□□□ 0.39
SSBP1-214ENST00000498107 FNDC1Q4ZHG4 1894 aaPredicted RBP17.48■□□□□ 0.39
SSBP1-214ENST00000498107 LCHNA4D1U4 455 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 LINC01553A4QN01 128 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 OFD1O75665 1012 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 PRPF6O94906 941 aaKnown RBP17.48■□□□□ 0.39
SSBP1-214ENST00000498107 GRM5P41594 1212 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 CASP5P51878 434 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 SNRPFP62306 86 aaKnown RBP17.48■□□□□ 0.39
SSBP1-214ENST00000498107 PNOCQ13519 176 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 PAN2Q504Q3 1202 aaKnown RBP17.48■□□□□ 0.39
SSBP1-214ENST00000498107 NOMO2Q5JPE7 1267 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 CLLU1OSQ5K130 101 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 EPM2AIP1Q7L775 607 aaPredicted RBP17.48■□□□□ 0.39
SSBP1-214ENST00000498107 ZBTB33Q86T24 672 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 SMARCE1Q969G3 411 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 CASD1Q96PB1 797 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 SLC39A2Q9NP94 309 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 RNF19AQ9NV58 838 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 HES2Q9Y543 173 aa17.48■□□□□ 0.39
SSBP1-214ENST00000498107 ABLIM1O14639 778 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 KIAA0391O15091 583 aaKnown RBP17.47■□□□□ 0.39
SSBP1-214ENST00000498107 INPPL1O15357 1258 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 HARSP12081 509 aaKnown RBP17.47■□□□□ 0.39
SSBP1-214ENST00000498107 GATMP50440 423 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 TAP1Q03518 808 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 RNASELQ05823 741 aaKnown RBP17.47■□□□□ 0.39
SSBP1-214ENST00000498107 HSP90AA2PQ14568 343 aaPredicted RBP17.47■□□□□ 0.39
SSBP1-214ENST00000498107 BMT2Q1RMZ1 405 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 SPOUT1Q5T280 376 aaKnown RBP17.47■□□□□ 0.39
SSBP1-214ENST00000498107 CLP1Q92989 425 aaKnown RBP17.47■□□□□ 0.39
SSBP1-214ENST00000498107 HPS3Q969F9 1004 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 ZBTB45Q96K62 511 aaPredicted RBP17.47■□□□□ 0.39
SSBP1-214ENST00000498107 ACAP3Q96P50 834 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 RPS6KC1Q96S38 1066 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 MSTO1Q9BUK6 570 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 FGFBP2Q9BYJ0 223 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 GBP3Q9H0R5 595 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 ZNF576Q9H609 170 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 SNTG2Q9NY99 539 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 CGNQ9P2M7 1197 aaKnown RBP17.47■□□□□ 0.39
SSBP1-214ENST00000498107 INPP5FQ9Y2H2 1132 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 STYXL1Q9Y6J8 313 aa17.47■□□□□ 0.39
SSBP1-214ENST00000498107 A0A0B4J269 797 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 ARL5CA6NH57 179 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 MEIS3P2A8K0S8 358 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 OGTO15294 1046 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 RECQL4O94761 1208 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 CLTAP09496 248 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 GARTP22102 1010 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 AKAP5P24588 427 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 ERVK-21P61565 698 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 STK4Q13043 487 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 HS2ST1Q7LGA3 356 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 THNSL1Q8IYQ7 743 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 SPATA20Q8TB22 786 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 GOLGA5Q8TBA6 731 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 SCFD1Q8WVM8 642 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 POMGNT1Q8WZA1 660 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 FAM193BQ96PV7 902 aaPredicted RBP17.46■□□□□ 0.39
SSBP1-214ENST00000498107 GAD1Q99259 594 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 RNF39Q9H2S5 420 aa17.46■□□□□ 0.39
SSBP1-214ENST00000498107 TYW1Q9NV66 732 aaKnown RBP17.46■□□□□ 0.39
SSBP1-214ENST00000498107 GDAQ9Y2T3 454 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 143.4 ms