RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 ZSWIM4Q9H7M6 989 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 MIOSQ9NXC5 875 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 GIT1Q9Y2X7 761 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 HES2Q9Y543 173 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 MYO15AQ9UKN7 3530 aa15.87■□□□□ 0.13
VARS-228ENST00000495010 TADA2AO75478 443 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 BAG4O95429 457 aaKnown RBP15.86■□□□□ 0.13
VARS-228ENST00000495010 XBP1P17861 261 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 PPP4R3AQ6IN85 833 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 FUT10Q6P4F1 479 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 RUFY3Q7L099 469 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 DGLUCYQ7Z3D6 616 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 C1orf210Q8IVY1 113 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 RNF168Q8IYW5 571 aaPredicted RBP15.86■□□□□ 0.13
VARS-228ENST00000495010 DYDC2Q96IM9 177 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 B3GALT6Q96L58 329 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 ZFP42Q96MM3 310 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 CCDC43Q96MW1 224 aaKnown RBP15.86■□□□□ 0.13
VARS-228ENST00000495010 KCNMB3Q9NPA1 279 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 CHST7Q9NS84 486 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 FNIP2Q9P278 1114 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 WRAP73Q9P2S5 460 aaPredicted RBP15.86■□□□□ 0.13
VARS-228ENST00000495010 ADAM28Q9UKQ2 775 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 KCNJ14Q9UNX9 436 aa15.86■□□□□ 0.13
VARS-228ENST00000495010 F8W810 466 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 TBX3O15119 743 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 REC8O95072 547 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 FSHRP23945 695 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 PTENP60484 403 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 CYP4A11Q02928 519 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 STK3Q13188 491 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 CTTNQ14247 550 aaKnown RBP15.85■□□□□ 0.13
VARS-228ENST00000495010 TPH2Q8IWU9 490 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 GPR65Q8IYL9 337 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 RMDN1Q96DB5 314 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 AIFM3Q96NN9 605 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 GPR62Q9BZJ7 368 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 SLC2A4RGQ9NR83 387 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 RGL1Q9NZL6 768 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 PARP2Q9UGN5 583 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 CYP46A1Q9Y6A2 500 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 ZFP37Q9Y6Q3 630 aaPredicted RBP15.85■□□□□ 0.13
VARS-228ENST00000495010 NUMBLQ9Y6R0 609 aa15.85■□□□□ 0.13
VARS-228ENST00000495010 ANHXE9PGG2 379 aa15.84■□□□□ 0.13
VARS-228ENST00000495010 ZMYND10O75800 440 aa15.84■□□□□ 0.13
VARS-228ENST00000495010 EFEMP2O95967 443 aa15.84■□□□□ 0.13
VARS-228ENST00000495010 SP9P0CG40 484 aa15.84■□□□□ 0.13
VARS-228ENST00000495010 RPL17P18621 184 aaKnown RBP15.84■□□□□ 0.13
VARS-228ENST00000495010 AKAP5P24588 427 aa15.84■□□□□ 0.13
VARS-228ENST00000495010 GRIK3Q13003 919 aa15.84■□□□□ 0.13
VARS-228ENST00000495010 HTR4Q13639 388 aa15.84■□□□□ 0.13
VARS-228ENST00000495010 TOB2Q14106 344 aaPredicted RBP15.84■□□□□ 0.13
VARS-228ENST00000495010 LIN9Q5TKA1 542 aa15.84■□□□□ 0.13
VARS-228ENST00000495010 SLFN12Q8IYM2 578 aa15.84■□□□□ 0.13
VARS-228ENST00000495010 RUBCNQ92622 972 aa15.84■□□□□ 0.13
VARS-228ENST00000495010 ZNF274Q96GC6 653 aaPredicted RBP15.84■□□□□ 0.13
VARS-228ENST00000495010 NXF3Q9H4D5 531 aaKnown RBP15.84■□□□□ 0.13
VARS-228ENST00000495010 TDRD15B5MCY1 1934 aaKnown RBP15.84■□□□□ 0.13
VARS-228ENST00000495010 ZBTB39O15060 712 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 CDKL5O76039 1030 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 NPTXRO95502 500 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 ARF4P18085 180 aaPredicted RBP15.83■□□□□ 0.12
VARS-228ENST00000495010 MBTD1Q05BQ5 628 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 POU5F1BQ06416 359 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 PUM1Q14671 1186 aaKnown RBP eCLIP15.83■□□□□ 0.122e-6■□□□□ 8.9
VARS-228ENST00000495010 NPY5RQ15761 445 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 SLC27A1Q6PCB7 646 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 LILRA6Q6PI73 481 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 PIK3AP1Q6ZUJ8 805 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 ST13P5Q8NFI4 369 aaPredicted RBP15.83■□□□□ 0.12
VARS-228ENST00000495010 PJA1Q8NG27 643 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 LARP6Q9BRS8 491 aaKnown RBP15.83■□□□□ 0.12
VARS-228ENST00000495010 PHF20Q9BVI0 1012 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 FOXQ1Q9C009 403 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 KLK14Q9P0G3 267 aa15.83■□□□□ 0.12
VARS-228ENST00000495010 SF3B1O75533 1304 aaKnown RBP eCLIP15.83■□□□□ 0.12
VARS-228ENST00000495010 KINO60870 393 aaKnown RBP15.82■□□□□ 0.12
VARS-228ENST00000495010 DGAT1O75907 488 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 PAPLNO95428 1278 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
VARS-228ENST00000495010 PPM1LQ5SGD2 360 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 PRSS55Q6UWB4 352 aaPredicted RBP15.82■□□□□ 0.12
VARS-228ENST00000495010 MTSS1LQ765P7 747 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 GRASPQ7Z6J2 395 aaPredicted RBP15.82■□□□□ 0.12
VARS-228ENST00000495010 CEP57Q86XR8 500 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 POTEDQ86YR6 584 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 IFNLR1Q8IU57 520 aaPredicted RBP15.82■□□□□ 0.12
VARS-228ENST00000495010 RABGGTAQ92696 567 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 HAS1Q92839 578 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 BCO2Q9BYV7 579 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 ZSWIM6Q9HCJ5 1215 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 XPNPEP1Q9NQW7 623 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 DLGAP2Q9P1A6 1054 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 CDH7Q9ULB5 785 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 POLIQ9UNA4 740 aa15.82■□□□□ 0.12
VARS-228ENST00000495010 MTCL1Q9Y4B5 1905 aaKnown RBP15.82■□□□□ 0.12
VARS-228ENST00000495010 XYLBO75191 536 aa15.81■□□□□ 0.12
VARS-228ENST00000495010 HNRNPA1P09651 372 aaKnown RBP eCLIP15.81■□□□□ 0.12
VARS-228ENST00000495010 STARD6P59095 220 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms