RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SRGAP1Q7Z6B7 1085 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.57□□□□□ -1.04
PDPN-205ENST00000487038 GRASPQ7Z6J2 395 aaPredicted RBP8.57□□□□□ -1.04
PDPN-205ENST00000487038 MRPL10Q7Z7H8 261 aaKnown RBP8.57□□□□□ -1.04
PDPN-205ENST00000487038 GLYCTKQ8IVS8 523 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 EXOC8Q8IYI6 725 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 COLGALT2Q8IYK4 626 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 BICD2Q8TD16 824 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 SLC7A3Q8WY07 619 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 FGF13Q92913 245 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 CLDN23Q96B33 292 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 RIT2Q99578 217 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 NIFKQ9BYG3 293 aaKnown RBP8.57□□□□□ -1.04
PDPN-205ENST00000487038 PARD6AQ9NPB6 346 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 CHST7Q9NS84 486 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 FAM217BQ9NTX9 383 aaPredicted RBP8.57□□□□□ -1.04
PDPN-205ENST00000487038 FBXW11Q9UKB1 542 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 POLIQ9UNA4 740 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 COL4A3BPQ9Y5P4 624 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 ITPR1Q14643 2758 aa8.57□□□□□ -1.04
PDPN-205ENST00000487038 SF3B1O75533 1304 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDPN-205ENST00000487038 IGKV6-21A0A0C4DH24 114 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 MAN2B1O00754 1011 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 ZBTB43O43298 467 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 DKC1O60832 514 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDPN-205ENST00000487038 GSPT1P15170 499 aaKnown RBP8.56□□□□□ -1.04
PDPN-205ENST00000487038 CD72P21854 359 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 CHMLP26374 656 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 HOXA9P31269 272 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 CIITAP33076 1130 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 MLH1P40692 756 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 CCR3P51677 355 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 NCBP1Q09161 790 aaKnown RBP8.56□□□□□ -1.04
PDPN-205ENST00000487038 ACAP1Q15027 740 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 PCBP1Q15365 356 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDPN-205ENST00000487038 CSRP2Q16527 193 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 PDXDC1Q6P996 788 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 TAS1R1Q7RTX1 841 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 MIER3Q7Z3K6 550 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 ST13P5Q8NFI4 369 aaPredicted RBP8.56□□□□□ -1.04
PDPN-205ENST00000487038 EXOC6Q8TAG9 804 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 DNASE1L2Q92874 299 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 MBOAT7Q96N66 472 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 KXD1Q9BQD3 176 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 RPP25Q9BUL9 199 aaKnown RBP8.56□□□□□ -1.04
PDPN-205ENST00000487038 TRIM6Q9C030 488 aaPredicted RBP8.56□□□□□ -1.04
PDPN-205ENST00000487038 ZMYND12Q9H0C1 365 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 IFT122Q9HBG6 1241 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 SEMA4GQ9NTN9 838 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 ADAM28Q9UKQ2 775 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 MTF2Q9Y483 593 aaPredicted RBP8.56□□□□□ -1.04
PDPN-205ENST00000487038 V9GY48 417 aaPredicted RBP8.56□□□□□ -1.04
PDPN-205ENST00000487038 MAST4O15021 2626 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 NOTCH4Q99466 2003 aa8.56□□□□□ -1.04
PDPN-205ENST00000487038 ARL5CA6NH57 179 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 GOLGA8AA7E2F4 631 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 GOLGA8BA8MQT2 603 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 MSH4O15457 936 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 ECI2O75521 394 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 EFEMP2O95967 443 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 C8AP07357 584 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 POU2F2P09086 479 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 AXLP30530 894 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 CNR2P34972 360 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 SCNN1GP51170 649 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 AFF1P51825 1210 aaKnown RBP8.55□□□□□ -1.04
PDPN-205ENST00000487038 DSC1Q08554 894 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 GRIK3Q13003 919 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 MTAPQ13126 283 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 COL9A3Q14050 684 aaPredicted RBP8.55□□□□□ -1.04
PDPN-205ENST00000487038 COL9A2Q14055 689 aaPredicted RBP8.55□□□□□ -1.04
PDPN-205ENST00000487038 LPAL2Q16609 132 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 PFKFB3Q16875 520 aaPredicted RBP8.55□□□□□ -1.04
PDPN-205ENST00000487038 NOTUMQ6P988 496 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 LILRA6Q6PI73 481 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 KSR1Q8IVT5 923 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 CCDC148Q8NFR7 591 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 PSPC1Q8WXF1 523 aaKnown RBP8.55□□□□□ -1.04
PDPN-205ENST00000487038 CCDC51Q96ER9 411 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 LRRC2Q9BYS8 371 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 CHRDQ9H2X0 955 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 UNC45AQ9H3U1 944 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 SH2B1Q9NRF2 756 aaPredicted RBP8.55□□□□□ -1.04
PDPN-205ENST00000487038 KCNH3Q9ULD8 1083 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 PPME1Q9Y570 386 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 IPPQ9Y573 584 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 F5P12259 2224 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 ZMYM2Q9UBW7 1377 aa8.55□□□□□ -1.04
PDPN-205ENST00000487038 CCDC196A0A1B0GTZ2 297 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 CCL16O15467 120 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 TADA2AO75478 443 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 RPL17P18621 184 aaKnown RBP8.54□□□□□ -1.04
PDPN-205ENST00000487038 RCAN1P53805 252 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 SHC2P98077 582 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 SIM2Q14190 667 aaPredicted RBP8.54□□□□□ -1.04
PDPN-205ENST00000487038 PSMD5Q16401 504 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 AASDHQ4L235 1098 aaPredicted RBP8.54□□□□□ -1.04
PDPN-205ENST00000487038 PABPC1LQ4VXU2 614 aaKnown RBP8.54□□□□□ -1.04
PDPN-205ENST00000487038 UBXN11Q5T124 520 aa8.54□□□□□ -1.04
PDPN-205ENST00000487038 RNF20Q5VTR2 975 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms