RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 RNF168Q8IYW5 571 aaPredicted RBP21.59■■□□□ 1.05
R3HDM1-215ENST00000483021 ZFP42Q96MM3 310 aa21.59■■□□□ 1.05
R3HDM1-215ENST00000483021 RPS6KC1Q96S38 1066 aa21.59■■□□□ 1.05
R3HDM1-215ENST00000483021 B4GALT5O43286 388 aa21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 MED24O75448 989 aa21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 SEC24BO95487 1268 aa21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 GRIK3Q13003 919 aa21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 HAUS3Q68CZ6 603 aa21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 CDCA2Q69YH5 1023 aaPredicted RBP21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 C15orf39Q6ZRI6 1047 aa21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 CCDC149Q6ZUS6 474 aa21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 COLEC11Q9BWP8 271 aa21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 C2orf40Q9H1Z8 148 aa21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 GPRC5CQ9NQ84 441 aa21.58■■□□□ 1.05
R3HDM1-215ENST00000483021 MTCL1Q9Y4B5 1905 aaKnown RBP21.58■■□□□ 1.04
R3HDM1-215ENST00000483021 C2CD2LO14523 706 aa21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 NPTXRO95502 500 aa21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 EFEMP2O95967 443 aa21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 MUTP22033 750 aa21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 RPA1P27694 616 aa21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 GNL2Q13823 731 aaKnown RBP21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 KANK3Q6NY19 840 aa21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 MAEAQ7L5Y9 396 aa21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 PIAS4Q8N2W9 510 aaPredicted RBP21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 PRSS33Q8NF86 280 aa21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 ACSF2Q96CM8 615 aaPredicted RBP21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 ZSCAN31Q96LW9 406 aaPredicted RBP21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 MIOSQ9NXC5 875 aa21.57■■□□□ 1.04
R3HDM1-215ENST00000483021 A0A087WWV3 80 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 GLUD1P00367 558 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 TRAPPC10P48553 1259 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 RBM25P49756 843 aaKnown RBP21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 MRE11P49959 708 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 DSG1Q02413 1049 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 FAM187BQ17R55 369 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 POTEGQ6S5H5 508 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 OTOP3Q7RTS5 596 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 GPR65Q8IYL9 337 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 FAM184AQ8NB25 1140 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 CMASQ8NFW8 434 aaPredicted RBP21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 FBXO18Q8NFZ0 1043 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 MAN1C1Q9NR34 630 aa21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 SH2B1Q9NRF2 756 aaPredicted RBP21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 DAXXQ9UER7 740 aaPredicted RBP21.56■■□□□ 1.04
R3HDM1-215ENST00000483021 CACNA1HO95180 2353 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 ARHGEF35A5YM69 484 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 N4BP3O15049 544 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 TEX28O15482 410 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 BRD1O95696 1058 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 C1RP00736 705 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 AKAP5P24588 427 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 PPP2R5AQ15172 486 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 ZNF174Q15697 407 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 TTC38Q5R3I4 469 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 IER5LQ5T953 404 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 KIAA0319Q5VV43 1072 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 PADI6Q6TGC4 694 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 CYP26C1Q6V0L0 522 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 CDR2LQ86X02 465 aaPredicted RBP21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 NOSTRINQ8IVI9 506 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 GSTCDQ8NEC7 633 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 RHOBTB2Q9BYZ6 727 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 FZD8Q9H461 694 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 RXFP1Q9HBX9 757 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 PARP2Q9UGN5 583 aa21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 NOL7Q9UMY1 257 aaKnown RBP21.55■■□□□ 1.04
R3HDM1-215ENST00000483021 CYP11B2P19099 503 aa21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 NAMPTP43490 491 aa21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 NUBP1P53384 320 aa21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 VCPP55072 806 aaKnown RBP21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 CREMQ03060 361 aa21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 MAPK6Q16659 721 aa21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 FUT10Q6P4F1 479 aa21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 TAS1R1Q7RTX1 841 aa21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 HDAC7Q8WUI4 952 aa21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 CHST7Q9NS84 486 aa21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 ADAM28Q9UKQ2 775 aa21.54■■□□□ 1.04
R3HDM1-215ENST00000483021 ASGR2P07307 311 aa21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 AVPR2P30518 371 aa21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 FXR2P51116 673 aaKnown RBP eCLIP21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 PRPF4BQ13523 1007 aaKnown RBP21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 TMEM132AQ24JP5 1023 aa21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 USP41Q3LFD5 358 aa21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 DEPTORQ8TB45 409 aa21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 ADPGKQ9BRR6 497 aa21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 IRF2BPLQ9H1B7 796 aa21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 KLK14Q9P0G3 267 aa21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 LIMD1Q9UGP4 676 aa21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 STK24Q9Y6E0 443 aa21.53■■□□□ 1.04
R3HDM1-215ENST00000483021 F8W810 466 aa21.52■■□□□ 1.04
R3HDM1-215ENST00000483021 PRKCBP05771 671 aa21.52■■□□□ 1.04
R3HDM1-215ENST00000483021 TUSC3Q13454 348 aa21.52■■□□□ 1.04
R3HDM1-215ENST00000483021 STAMQ92783 540 aa21.52■■□□□ 1.04
R3HDM1-215ENST00000483021 RAB34Q9BZG1 259 aa21.52■■□□□ 1.04
R3HDM1-215ENST00000483021 PLEKHA4Q9H4M7 779 aa21.52■■□□□ 1.04
R3HDM1-215ENST00000483021 PDZD7Q9H5P4 517 aa21.52■■□□□ 1.04
R3HDM1-215ENST00000483021 SF3B1O75533 1304 aaKnown RBP eCLIP21.52■■□□□ 1.033e-6■■■■■ 102.4
R3HDM1-215ENST00000483021 ACKR2O00590 384 aa21.51■■□□□ 1.03
R3HDM1-215ENST00000483021 PDGFBP01127 241 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms