RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 GIT2Q14161 759 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 GPR149Q86SP6 731 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
VARS2-208ENST00000477052 GSTCDQ8NEC7 633 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 HASPINQ8TF76 798 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 BSNDQ8WZ55 320 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 RPS6KC1Q96S38 1066 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 HERC2P3Q9BVR0 1158 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 GPR62Q9BZJ7 368 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 SFXN1Q9H9B4 322 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 N4BP1O75113 896 aaKnown RBP12.93□□□□□ -0.34
VARS2-208ENST00000477052 EDN1P05305 212 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 GLUD2P49448 558 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 PTPN5P54829 565 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 NCBP1Q09161 790 aaKnown RBP12.93□□□□□ -0.34
VARS2-208ENST00000477052 ECM1Q16610 540 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 KIAA0319Q5VV43 1072 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 PPFIBP1Q86W92 1011 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 ZDHHC14Q8IZN3 488 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 TMEM105Q8N8V8 129 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 CNNM3Q8NE01 707 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 RSAD2Q8WXG1 361 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 RSPH1Q8WYR4 309 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 KIFC3Q9BVG8 833 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 UBN1Q9NPG3 1134 aa12.93□□□□□ -0.34
VARS2-208ENST00000477052 TDRD15B5MCY1 1934 aaKnown RBP12.93□□□□□ -0.34
VARS2-208ENST00000477052 CASTOR2A6NHX0 329 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 INPPL1O15357 1258 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 EFEMP2O95967 443 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 IGFBP6P24592 240 aaPredicted RBP12.92□□□□□ -0.34
VARS2-208ENST00000477052 POU5F1BQ06416 359 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 SLC27A1Q6PCB7 646 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 PRSS55Q6UWB4 352 aaPredicted RBP12.92□□□□□ -0.34
VARS2-208ENST00000477052 CCDC149Q6ZUS6 474 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 DENND4AQ7Z401 1863 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 NOSTRINQ8IVI9 506 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 RNF168Q8IYW5 571 aaPredicted RBP12.92□□□□□ -0.34
VARS2-208ENST00000477052 RIN2Q8WYP3 895 aaPredicted RBP12.92□□□□□ -0.34
VARS2-208ENST00000477052 CCDC51Q96ER9 411 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 C8orf76Q96K31 380 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 SNTG2Q9NY99 539 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 GIT1Q9Y2X7 761 aa12.92□□□□□ -0.34
VARS2-208ENST00000477052 A0A1B0GUA9 196 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 NARSO43776 548 aaKnown RBP12.91□□□□□ -0.34
VARS2-208ENST00000477052 DSG1Q02413 1049 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 SAFBQ15424 915 aaKnown RBP eCLIP12.91□□□□□ -0.34
VARS2-208ENST00000477052 TMEM132AQ24JP5 1023 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 EEF1DP3Q658K8 133 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 FUT10Q6P4F1 479 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 PADI6Q6TGC4 694 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 UBALD2Q8IYN6 164 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 FLCNQ8NFG4 579 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 ATOH1Q92858 354 aaPredicted RBP12.91□□□□□ -0.34
VARS2-208ENST00000477052 COLEC11Q9BWP8 271 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 PDZD7Q9H5P4 517 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 TUFT1Q9NNX1 390 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 LIMCH1Q9UPQ0 1083 aa12.91□□□□□ -0.34
VARS2-208ENST00000477052 ARHGEF35A5YM69 484 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 CARNS1A5YM72 827 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 PTGESO14684 152 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 TGM5O43548 720 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 PI15O43692 258 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 TADA2AO75478 443 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 GLUD1P00367 558 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 ADH1AP07327 375 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 OR52Z1P0C646 297 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 GBP2P32456 591 aaPredicted RBP12.9□□□□□ -0.34
VARS2-208ENST00000477052 RTP2Q5QGT7 225 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 TTC38Q5R3I4 469 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 CEP57Q86XR8 500 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 SMG7Q92540 1137 aaKnown RBP12.9□□□□□ -0.34
VARS2-208ENST00000477052 ZNF707Q96C28 371 aaPredicted RBP12.9□□□□□ -0.34
VARS2-208ENST00000477052 ACSF2Q96CM8 615 aaPredicted RBP12.9□□□□□ -0.34
VARS2-208ENST00000477052 NACC1Q96RE7 527 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 MYADMQ96S97 322 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 NFKBIZQ9BYH8 718 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 MFSD1Q9H3U5 465 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 FZD8Q9H461 694 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 KCNK12Q9HB15 430 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 RXFP1Q9HBX9 757 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 CHST7Q9NS84 486 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 ADAM28Q9UKQ2 775 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 USTQ9Y2C2 406 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 GDAQ9Y2T3 454 aa12.9□□□□□ -0.34
VARS2-208ENST00000477052 USP34Q70CQ2 3546 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 PP2D1A8MPX8 630 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 NR1I2O75469 434 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 RECQL4O94761 1208 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 KIF4AO95239 1232 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 PRKCBP05771 671 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 XRCC6P12956 609 aaKnown RBP eCLIP12.89□□□□□ -0.35
VARS2-208ENST00000477052 CCT6AP40227 531 aaKnown RBP12.89□□□□□ -0.35
VARS2-208ENST00000477052 GRIK3Q13003 919 aa12.89□□□□□ -0.35
VARS2-208ENST00000477052 PRPF4BQ13523 1007 aaKnown RBP12.89□□□□□ -0.35
VARS2-208ENST00000477052 HSP90AA2PQ14568 343 aaPredicted RBP12.89□□□□□ -0.35
VARS2-208ENST00000477052 PCBP1Q15365 356 aaKnown RBP eCLIP12.89□□□□□ -0.35
VARS2-208ENST00000477052 CDCA2Q69YH5 1023 aaPredicted RBP12.89□□□□□ -0.35
VARS2-208ENST00000477052 PPP4R3CPQ6ZMV5 832 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms