RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	DIP2A	Q14689	1571 aa		6.61	□□□□□ -1.35
PRKD3-208	ENST00000475912	NKTR	P30414	1462 aa	Known RBP	6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	CAMSAP2	Q08AD1	1489 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	FYCO1	Q9BQS8	1478 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	TMEM2	Q9UHN6	1383 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	PRSS38	A1L453	326 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	KDM1A	O60341	852 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	PFKM	P08237	780 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	KIR2DL3	P43628	341 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	FOXE3	Q13461	319 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	DDB1	Q16531	1140 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	ATP13A4	Q4VNC1	1196 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	TAF7L	Q5H9L4	462 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	BROX	Q5VW32	411 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	FAM111B	Q6SJ93	734 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	RNF180	Q86T96	592 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	THNSL2	Q86YJ6	484 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	C1orf210	Q8IVY1	113 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	CDYL2	Q8N8U2	506 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	IL17D	Q8TAD2	202 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	SLC5A5	Q92911	643 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	USP7	Q93009	1102 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	UIMC1	Q96RL1	719 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	MPHOSPH9	Q99550	1183 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	TCF25	Q9BQ70	676 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	ZNF341	Q9BYN7	854 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	OSBPL6	Q9BZF3	934 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	NCDN	Q9UBB6	729 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	TMA7	Q9Y2S6	64 aa	Known RBP	6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	PPP2R3B	Q9Y5P8	575 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	AHDC1	Q5TGY3	1603 aa	Predicted RBP	6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	MROH1	Q8NDA8	1641 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	CCDC141	Q6ZP82	1450 aa		6.6	□□□□□ -1.35
PRKD3-208	ENST00000475912	AKAP8	O43823	692 aa	Known RBP	6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	FSBP	O95073	299 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	JUN	P05412	331 aa	Known RBP	6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	CLEC2L	P0C7M8	214 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	GAA	P10253	952 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	DGCR2	P98153	550 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	MAN2A1	Q16706	1144 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	SDE2	Q6IQ49	451 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	UBR7	Q8N806	425 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	SLC16A11	Q8NCK7	471 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	PIK3C3	Q8NEB9	887 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	ANO3	Q9BYT9	981 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	GIT1	Q9Y2X7	761 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	EID1	Q9Y6B2	187 aa		6.59	□□□□□ -1.35
PRKD3-208	ENST00000475912	MAST1	Q9Y2H9	1570 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	RAB11FIP3	O75154	756 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	C1S	P09871	688 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	BPI	P17213	487 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	ID4	P47928	161 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	CD69	Q07108	199 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	DHCR24	Q15392	516 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	MIIP	Q5JXC2	388 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	FRMD7	Q6ZUT3	714 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	PPP1R14C	Q8TAE6	165 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	GAB3	Q8WWW8	586 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	ZNF503	Q96F45	646 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	CSRNP2	Q9H175	543 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	ING3	Q9NXR8	418 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	KDM5A	P29375	1690 aa	Known RBP	6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	PIK3C2B	O00750	1634 aa		6.58	□□□□□ -1.36
PRKD3-208	ENST00000475912	NEMP1	O14524	444 aa		6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	HSD3B2	P26439	372 aa		6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	MANF	P55145	182 aa	Known RBP	6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	RBM6	P78332	1123 aa	Known RBP	6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	PPARA	Q07869	468 aa		6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	CRHR2	Q13324	411 aa		6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	ELAVL1	Q15717	326 aa	Known RBP	6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	DDX46	Q7L014	1031 aa	Known RBP	6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	UNC5B	Q8IZJ1	945 aa		6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	CMTM4	Q8IZR5	234 aa		6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	ARL8A	Q96BM9	186 aa		6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	FDXACB1	Q9BRP7	624 aa	Predicted RBP	6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	SLK	Q9H2G2	1235 aa	Predicted RBP	6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	NOC2L	Q9Y3T9	749 aa	Known RBP	6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	HS3ST3A1	Q9Y663	406 aa		6.57	□□□□□ -1.36
PRKD3-208	ENST00000475912	NPIPB8	E9PQR5	432 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	CYP27B1	O15528	508 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	MTSS1	O43312	755 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	FZD7	O75084	574 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	ALDH1A2	O94788	518 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	SEC24D	O94855	1032 aa	Predicted RBP	6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	LY86	O95711	162 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	PTH1R	Q03431	593 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	STRN3	Q13033	797 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	FKBP15	Q5T1M5	1219 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	CCDC62	Q6P9F0	684 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912		Q6ZRM9	215 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	STRA8	Q7Z7C7	330 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	RASSF3	Q86WH2	238 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	ANKRD35	Q8N283	1001 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	MIEF2	Q96C03	454 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	PLEKHG4B	Q96PX9	1271 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	PRDM12	Q9H4Q4	367 aa		6.56	□□□□□ -1.36
PRKD3-208	ENST00000475912	IFT22	Q9H7X7	185 aa		6.56	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms