RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 AGBL5Q8NDL9 886 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 GMCL1P1Q8NEA9 526 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 COA7Q96BR5 231 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 CNOT6LQ96LI5 555 aaKnown RBP6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 MTMR9Q96QG7 549 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 NAPGQ99747 312 aaPredicted RBP6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 TUBGCP2Q9BSJ2 902 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 TANGO6Q9C0B7 1094 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 ACBD3Q9H3P7 528 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 DEF6Q9H4E7 631 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 HAUS4Q9H6D7 363 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 DBNDD1Q9H9R9 158 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 JMJD4Q9H9V9 463 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 LZTFL1Q9NQ48 299 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 TMEM260Q9NX78 707 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 PCDHA12Q9UN75 941 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 CYP8B1Q9UNU6 501 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 MAPK8IP1Q9UQF2 711 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 PCDHA1Q9Y5I3 950 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 QSER1Q2KHR3 1735 aa6.49□□□□□ -1.37
ATPAF1-204ENST00000474020 MYH1P12882 1939 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 A0A1W2PQJ5 194 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 PPIP5K2O43314 1243 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 ATP8B1O43520 1251 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 KLRC4O43908 158 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 GYPCP04921 128 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 SSBP05455 408 aaKnown RBP eCLIP6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 EEF2P13639 858 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 ZNF76P36508 570 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 FAM193AP78312 1265 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 ZBED6P86452 979 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 TCP10Q12799 353 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 MAN2A1Q16706 1144 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 CCDC40Q4G0X9 1142 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 CCDC93Q567U6 631 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 NAALADL2Q58DX5 795 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 FIGNQ5HY92 759 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 TEX35Q5T0J7 233 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 SYDE2Q5VT97 1194 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 APOBEC3HQ6NTF7 200 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 TTI2Q6NXR4 508 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 TRIM65Q6PJ69 517 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 STXBP4Q6ZWJ1 553 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 RTKN2Q8IZC4 609 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 MYOCDQ8IZQ8 938 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 CERS5Q8N5B7 392 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 RABGGTAQ92696 567 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 MKL1Q969V6 931 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 FAM20AQ96MK3 541 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 ALS2CR12Q96Q35 445 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 DNAJC7Q99615 494 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 DESI2Q9BSY9 194 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 CARD6Q9BX69 1037 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 ANO3Q9BYT9 981 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 CPVLQ9H3G5 476 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 DDX4Q9NQI0 724 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 HERC5Q9UII4 1024 aaKnown RBP6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 CAPN11Q9UMQ6 739 aa6.48□□□□□ -1.37
ATPAF1-204ENST00000474020 COL2A1P02458 1487 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CTAGE15A4D2H0 777 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 TRIM49BA6NDI0 452 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 B4DLN1 442 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 TBCAO75347 108 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 EIF3JO75822 258 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 NDUFA10O95299 355 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 TDP2O95551 362 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CELA3AP09093 270 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CTAGE8P0CG41 777 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 VEGFAP15692 232 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 RPL13P26373 211 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 GNA15P30679 374 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 SLC16A2P36021 539 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 FXR1P51114 621 aaKnown RBP eCLIP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CHMP4BP1P59074 171 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 C1QTNF8P60827 252 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CDK17Q00537 523 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 GABPB1Q06547 395 aaPredicted RBP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 KIF5AQ12840 1032 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 TNIP1Q15025 636 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 UBE2SQ16763 222 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 SLC35G1Q2M3R5 365 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 QRICH1Q2TAL8 776 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 TMEM119Q4V9L6 283 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 PPM1JQ5JR12 505 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 FAM26FQ5R3K3 315 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 RASIP1Q5U651 963 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 PCNX4Q63HM2 1172 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 RAD9BQ6WBX8 426 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 KCTD1Q719H9 257 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 SND1Q7KZF4 910 aaKnown RBP eCLIP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 APTXQ7Z2E3 356 aaKnown RBP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CACNA2D4Q7Z3S7 1137 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CTAGE6Q86UF2 777 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CTAGE4Q8IX94 777 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 TP53INP2Q8IXH6 220 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 FLCNQ8NFG4 579 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 NEK11Q8NG66 645 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 CHURC1Q8WUH1 139 aa6.47□□□□□ -1.37
ATPAF1-204ENST00000474020 UBE2Q2Q8WVN8 375 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms