RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 SPATA6Q9NWH7 488 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-205ENST00000470585 RAB23Q9ULC3 237 aa7.63□□□□□ -1.19
SF3A3-205ENST00000470585 TAF6LQ9Y6J9 622 aa7.63□□□□□ -1.19
SF3A3-205ENST00000470585 NUMBLQ9Y6R0 609 aa7.63□□□□□ -1.19
SF3A3-205ENST00000470585 ZFYVE26Q68DK2 2539 aa7.63□□□□□ -1.19
SF3A3-205ENST00000470585 NID2Q14112 1375 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 A0A087WZ62 844 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 MAN2B1O00754 1011 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 ZBTB43O43298 467 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 GAS7O60861 476 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 ECI2O75521 394 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 DDHD2O94830 711 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 GSPT1P15170 499 aaKnown RBP7.62□□□□□ -1.19
SF3A3-205ENST00000470585 FSHRP23945 695 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 RFC5P40937 340 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 LIMK1P53667 647 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 NCBP1Q09161 790 aaKnown RBP7.62□□□□□ -1.19
SF3A3-205ENST00000470585 ELAVL2Q12926 359 aaKnown RBP7.62□□□□□ -1.19
SF3A3-205ENST00000470585 SLC44A4Q53GD3 710 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 PRR16Q569H4 304 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 SPECC1Q5M775 1068 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 B3GNT9Q6UX72 402 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 ZNF852Q6ZMS4 543 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 CMTR1Q8N1G2 835 aaKnown RBP7.62□□□□□ -1.19
SF3A3-205ENST00000470585 DCLK2Q8N568 766 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 CCDC148Q8NFR7 591 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 SLC7A3Q8WY07 619 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 SLC5A5Q92911 643 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 MSANTD3Q96H12 275 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 FDXACB1Q9BRP7 624 aaPredicted RBP7.62□□□□□ -1.19
SF3A3-205ENST00000470585 GBP3Q9H0R5 595 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 IFT122Q9HBG6 1241 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 TRPV5Q9NQA5 729 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 MARCH5Q9NX47 278 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 GDE1Q9NZC3 331 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 SUCLA2Q9P2R7 463 aaPredicted RBP7.62□□□□□ -1.19
SF3A3-205ENST00000470585 FBXW11Q9UKB1 542 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 INPP5FQ9Y2H2 1132 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 GIT1Q9Y2X7 761 aa7.62□□□□□ -1.19
SF3A3-205ENST00000470585 V9GY48 417 aaPredicted RBP7.62□□□□□ -1.19
SF3A3-205ENST00000470585 SF3B1O75533 1304 aaKnown RBP eCLIP7.61□□□□□ -1.19
SF3A3-205ENST00000470585 CYP3A7-CYP3A51PA0A087WV96 503 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 hCG_1642624A0A1W2PR95 340 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 FAM170BA6NMN3 283 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 TGM5O43548 720 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 B4GALT3O60512 393 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 RFPL2O75678 378 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 PSMD10O75832 226 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 MICAL2O94851 1124 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 PAPSS2O95340 614 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-205ENST00000470585 HMGB1P09429 215 aaKnown RBP7.61□□□□□ -1.19
SF3A3-205ENST00000470585 CYP3A7P24462 503 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 HOXA6P31267 233 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 HOXA11P31270 313 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-205ENST00000470585 CCR3P51677 355 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 PSMC5P62195 406 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 GPC5P78333 572 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 CSTF1Q05048 431 aaKnown RBP7.61□□□□□ -1.19
SF3A3-205ENST00000470585 ADCY1Q08828 1119 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 DMWDQ09019 674 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 MXD4Q14582 209 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-205ENST00000470585 NECTIN1Q15223 517 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 TSGA10IPQ3SY00 556 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 Q4G0T1 1027 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 LIN9Q5TKA1 542 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 LRCH2Q5VUJ6 765 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 B4GALNT3Q6L9W6 998 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 NOTUMQ6P988 496 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 GET4Q7L5D6 327 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-205ENST00000470585 IFNLR1Q8IU57 520 aaPredicted RBP7.61□□□□□ -1.19
SF3A3-205ENST00000470585 RHPN2Q8IUC4 686 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 CCDC82Q8N4S0 544 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 TCP11Q8WWU5 503 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 PSPC1Q8WXF1 523 aaKnown RBP7.61□□□□□ -1.19
SF3A3-205ENST00000470585 PIK3R5Q8WYR1 880 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 LPPQ93052 612 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 PGBD1Q96JS3 809 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 NFKBIZQ9BYH8 718 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 FOXQ1Q9C009 403 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 CHRDQ9H2X0 955 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 DHX33Q9H6R0 707 aaKnown RBP7.61□□□□□ -1.19
SF3A3-205ENST00000470585 SH3GLB2Q9NR46 395 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 ADAM28Q9UKQ2 775 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 COL4A3BPQ9Y5P4 624 aa7.61□□□□□ -1.19
SF3A3-205ENST00000470585 TDRD15B5MCY1 1934 aaKnown RBP7.6□□□□□ -1.19
SF3A3-205ENST00000470585 ARL5CA6NH57 179 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 MEIS3P2A8K0S8 358 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 SLC27A2O14975 620 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 MSH4O15457 936 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 STBD1O95210 358 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 SSBP05455 408 aaKnown RBP eCLIP7.6□□□□□ -1.19
SF3A3-205ENST00000470585 TDGF1P13385 188 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 ITGA4P13612 1032 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 RXRAP19793 462 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 FGFR4P22455 802 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 OR1G1P47890 313 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 GRIK3Q13003 919 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 KRT32Q14532 448 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 UBXN2BQ14CS0 331 aa7.6□□□□□ -1.19
SF3A3-205ENST00000470585 CSRP2Q16527 193 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms