RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 HMGN5P82970 282 aaKnown RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 CTBSQ01459 385 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 TNFAIP1Q13829 316 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 GALEQ14376 348 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 RRP1BQ14684 758 aaKnown RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 RAB3GAP1Q15042 981 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 PDCD2Q16342 344 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 HP1BP3Q5SSJ5 553 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 JAKMIP3Q5VZ66 844 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 ICE2Q659A1 982 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 CPLX2Q6PUV4 134 aaKnown RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 CYFIP1Q7L576 1253 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 SIAH1Q8IUQ4 282 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 CCT6BQ92526 530 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 ACSF2Q96CM8 615 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 DDX11Q96FC9 970 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 TEPSINQ96N21 525 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 MAP3K14Q99558 947 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 DEFB129Q9H1M3 183 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 SOX17Q9H6I2 414 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 KAT14Q9H8E8 782 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 VTA1Q9NP79 307 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 EMC7Q9NPA0 242 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 ADARB2Q9NS39 739 aaKnown RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 KRT82Q9NSB4 513 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 THG1LQ9NWX6 298 aaKnown RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 SCAF8Q9UPN6 1271 aaKnown RBP5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 RABGAP1Q9Y3P9 1069 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 TRAF6Q9Y4K3 522 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 PCDHA9Q9Y5H5 950 aa5.86□□□□□ -1.47
HMGB1P4-201ENST00000455362 WDR33Q9C0J8 1336 aaKnown RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 GLTPD2A6NH11 291 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 CBX4O00257 560 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 MPHOSPH10O00566 681 aaKnown RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 RGS13O14921 159 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 STX6O43752 255 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 PPFIA3O75145 1194 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 CDKL5O76039 1030 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 TTLL1O95922 423 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 CAPNS1P04632 268 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 RHCEP18577 417 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 GUCY1A2P33402 732 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 KPNA1P52294 538 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 GUCY1A3Q02108 690 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 RHDQ02161 417 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 DSG1Q02413 1049 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 MAP4K2Q12851 820 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 TRIM14Q14142 442 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 ODF1Q14990 250 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 ELF2Q15723 593 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 CLUL1Q15846 466 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 SHROOM1Q2M3G4 852 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 PLA2G4EQ3MJ16 856 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 ANGEL2Q5VTE6 544 aaKnown RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 DCAF15Q66K64 600 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 GDF6Q6KF10 455 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 TREML4Q6UXN2 200 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 TMEM179Q6ZVK1 233 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 USP53Q70EK8 1073 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 MIGA2Q7L4E1 593 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 NBPF11Q86T75 865 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 MTDHQ86UE4 582 aaKnown RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 C12orf40Q86WS4 652 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 APOBEC3FQ8IUX4 373 aaKnown RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 TRIM59Q8IWR1 403 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 NUP133Q8WUM0 1156 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 TNPO1Q92973 898 aaKnown RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 TNFRSF25Q93038 417 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 MRGPRX3Q96LB0 322 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 CCDC74BQ96LY2 380 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 NAA15Q9BXJ9 866 aaKnown RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 MKRN2Q9H000 416 aaKnown RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 CSRNP2Q9H175 543 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 FAM204AQ9H8W3 233 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 C14orf119Q9NWQ9 140 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 WHRNQ9P202 907 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 NYAP2Q9P242 653 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 ORC3Q9UBD5 711 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 NXF1Q9UBU9 619 aaKnown RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 CLIP2Q9UDT6 1046 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 TPX2Q9ULW0 747 aaKnown RBP5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 STX8Q9UNK0 236 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 TRIM33Q9UPN9 1127 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 MTMR6Q9Y217 621 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 INVSQ9Y283 1065 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 KIF3AQ9Y496 699 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 CSADQ9Y600 493 aa5.85□□□□□ -1.47
HMGB1P4-201ENST00000455362 PITPNM2Q9BZ72 1349 aa5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 SCN4AP35499 1836 aa5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 H3BM21 787 aa5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 SOX1O00570 391 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 OFD1O75665 1012 aa5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 KCNH1O95259 989 aa5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 GDF11O95390 407 aa5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 GH2P01242 217 aa5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 SNRPB2P08579 225 aaKnown RBP5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 ZSCAN22P10073 491 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 KIF5BP33176 963 aa5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 CAP2P40123 477 aa5.84□□□□□ -1.47
HMGB1P4-201ENST00000455362 ADH7P40394 386 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms