RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 CLCN6P51797 869 aa20.4■□□□□ 0.86
SEMA3D-202ENST00000444867 ITIH3Q06033 890 aa20.4■□□□□ 0.86
SEMA3D-202ENST00000444867 CDCA2Q69YH5 1023 aaPredicted RBP20.4■□□□□ 0.86
SEMA3D-202ENST00000444867 ZNF572Q7Z3I7 529 aaPredicted RBP20.4■□□□□ 0.86
SEMA3D-202ENST00000444867 U2AF1L4Q8WU68 220 aaKnown RBP20.4■□□□□ 0.86
SEMA3D-202ENST00000444867 NT5C1BQ96P26 610 aa20.4■□□□□ 0.86
SEMA3D-202ENST00000444867 OSBPL9Q96SU4 736 aa20.4■□□□□ 0.86
SEMA3D-202ENST00000444867 C2orf40Q9H1Z8 148 aa20.4■□□□□ 0.86
SEMA3D-202ENST00000444867 RAB20Q9NX57 234 aa20.4■□□□□ 0.86
SEMA3D-202ENST00000444867 RNF14Q9UBS8 474 aa20.4■□□□□ 0.86
SEMA3D-202ENST00000444867 ZBTB42B2RXF5 422 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 SRGAP2O75044 1071 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 PALMO75781 387 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 C15orf39Q6ZRI6 1047 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 SV2AQ7L0J3 742 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 ENOSF1Q7L5Y1 443 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 ZBTB8OSQ8IWT0 167 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 FAM71AQ8IYT1 594 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 CAGE1Q8TC20 777 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 PRPF31Q8WWY3 499 aaKnown RBP20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 MMS19Q96T76 1030 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 AGPAT1Q99943 283 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 TLR10Q9BXR5 811 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 PARD6BQ9BYG5 372 aa20.39■□□□□ 0.86
SEMA3D-202ENST00000444867 A0A0B4J269 797 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 LRRN2O75325 713 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 GH1P01241 217 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 TFRCP02786 760 aaKnown RBP20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 MARK3P27448 753 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 ARHGAP1Q07960 439 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 BRD3Q15059 726 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 TAPT1Q6NXT6 567 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 TMCO3Q6UWJ1 677 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 MAMDC4Q6UXC1 1216 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 TRIM50Q86XT4 487 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 LMBR1Q8WVP7 490 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 SHC3Q92529 594 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 SEMA4DQ92854 862 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 COPS5Q92905 334 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 EMID1Q96A84 441 aaPredicted RBP20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 FNBP1Q96RU3 617 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 PDGFCQ9NRA1 345 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 ERAP1Q9NZ08 941 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 ZSWIM8A7E2V4 1837 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 NCANO14594 1321 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 ADGRA2Q96PE1 1338 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 CELF2O95319 508 aaKnown RBP20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 TMEM253P0C7T8 217 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 DLATP10515 647 aaKnown RBP20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 LAMTOR4Q0VGL1 99 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 FAM110CQ1W6H9 321 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 MEI1Q5TIA1 1274 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 CREG2Q8IUH2 290 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 GLYCTKQ8IVS8 523 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 TAS1R2Q8TE23 839 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 CAPZA3Q96KX2 299 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 POP1Q99575 1024 aaKnown RBP20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 MSTO1Q9BUK6 570 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 TARS2Q9BW92 718 aaKnown RBP20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 MRPL4Q9BYD3 311 aaKnown RBP20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 CCDC113Q9H0I3 377 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 ANKZF1Q9H8Y5 726 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 RAB21Q9UL25 225 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 TRPM7Q96QT4 1865 aa20.38■□□□□ 0.85
SEMA3D-202ENST00000444867 GRID2IPA4D2P6 1211 aa20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 CCDC151A5D8V7 595 aa20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 ASAP2O43150 1006 aa20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 GALCP54803 685 aa20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 NLRP11P59045 1033 aaKnown RBP20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 TFDP1Q14186 410 aa20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 ZNF484Q5JVG2 852 aa20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 CRELD2Q6UXH1 353 aaPredicted RBP20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 PPM1KQ8N3J5 372 aa20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 HELQQ8TDG4 1101 aa20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 CALR3Q96L12 384 aaKnown RBP20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 KREMEN1Q96MU8 473 aa20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 TOPORSQ9NS56 1045 aaPredicted RBP20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 TRPC6Q9Y210 931 aa20.37■□□□□ 0.85
SEMA3D-202ENST00000444867 CES2O00748 559 aa20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 MAPK4P31152 587 aa20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 GCNT1Q02742 428 aa20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 MKRN3Q13064 507 aaKnown RBP20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 MKRN4PQ13434 485 aaPredicted RBP20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 DRP2Q13474 957 aa20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 GRB14Q14449 540 aa20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 ZACNQ401N2 412 aa20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 GPR142Q7Z601 462 aa20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 PPTC7Q8NI37 304 aa20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 SUGCTQ9HAC7 445 aa20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 RBAKQ9NYW8 714 aaPredicted RBP20.36■□□□□ 0.85
SEMA3D-202ENST00000444867 KIF3CO14782 793 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 ZNF185O15231 689 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 ATP8B1O43520 1251 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 MSCO60682 206 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 MCM3P25205 808 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 PAFAH1B1P43034 410 aa20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 MATR3P43243 847 aaKnown RBP eCLIP20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 NOP2P46087 812 aaKnown RBP20.35■□□□□ 0.85
SEMA3D-202ENST00000444867 GRM1Q13255 1194 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms