RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 STK31Q9BXU1 1019 aa6.19□□□□□ -1.42
TM9SF3-202ENST00000443638 MTG2Q9H4K7 406 aa6.19□□□□□ -1.42
TM9SF3-202ENST00000443638 RRAGCQ9HB90 399 aa6.19□□□□□ -1.42
TM9SF3-202ENST00000443638 SMYD2Q9NRG4 433 aa6.19□□□□□ -1.42
TM9SF3-202ENST00000443638 COL20A1Q9P218 1284 aa6.19□□□□□ -1.42
TM9SF3-202ENST00000443638 CPNE7Q9UBL6 633 aa6.19□□□□□ -1.42
TM9SF3-202ENST00000443638 SLC39A10Q9ULF5 831 aa6.19□□□□□ -1.42
TM9SF3-202ENST00000443638 PLAGL2Q9UPG8 496 aa6.19□□□□□ -1.42
TM9SF3-202ENST00000443638 A0A0A6YYJ9 748 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 TCRBV5S2A0A599 114 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 PRAMEF22A3QJZ6 481 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 FAM171A2A8MVW0 826 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 IPO5O00410 1097 aaKnown RBP6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 NFIBO00712 420 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 OPHN1O60890 802 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 SEC24DO94855 1032 aaPredicted RBP6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 NTRK1P04629 796 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 BRAFP15056 766 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 ARFIP2P53365 341 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 SUMO3P55854 103 aaPredicted RBP6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 FOXO4P98177 505 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 EGR3Q06889 387 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 TAF12Q16514 161 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 PRRT3Q5FWE3 981 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 PRAMEF18Q5VWM3 479 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 TSHZ3Q63HK5 1081 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 TANGO2Q6ICL3 276 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 CLEC10AQ8IUN9 316 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 ESX1Q8N693 406 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 CDYL2Q8N8U2 506 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 CYP2W1Q8TAV3 490 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 ADAMTS18Q8TE60 1221 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 GAB3Q8WWW8 586 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 MEGF10Q96KG7 1140 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 FAM83CQ9BQN1 747 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 ADAM7Q9H2U9 754 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 RIC8AQ9NPQ8 531 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 GJB4Q9NTQ9 266 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 RBM12Q9NTZ6 932 aaKnown RBP6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 LRFN1Q9P244 771 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 PCDHB6Q9Y5E3 794 aa6.18□□□□□ -1.42
TM9SF3-202ENST00000443638 FAM170BA6NMN3 283 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 H3BUI4 141 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 ARIH2O95376 493 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 POLBP06746 335 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 HNRNPLP14866 589 aaKnown RBP eCLIP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 CTSSP25774 331 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 LIFRP42702 1097 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 CDC42EP1Q00587 391 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 DBPQ10586 325 aaPredicted RBP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 TARDBPQ13148 414 aaKnown RBP eCLIP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 PTK2BQ14289 1009 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 SPARCL1Q14515 664 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 NOLC1Q14978 699 aaKnown RBP eCLIP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 ALDH1L2Q3SY69 923 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 FAM133BQ5BKY9 247 aaKnown RBP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 C1QTNF12Q5T7M4 302 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 CIAPIN1Q6FI81 312 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 LIN54Q6MZP7 749 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 CREG2Q8IUH2 290 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 SIAH1Q8IUQ4 282 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 CELF5Q8N6W0 485 aaKnown RBP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 FANCBQ8NB91 859 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 LINC01599Q8WXQ3 324 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 HERVK_113Q902F9 699 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 CENPIQ92674 756 aaPredicted RBP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 NMD3Q96D46 503 aaKnown RBP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 SUCLG2Q96I99 432 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 TBC1D32Q96NH3 1257 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 C7orf25Q9BPX7 421 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 HEPHQ9BQS7 1158 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 FDXACB1Q9BRP7 624 aaPredicted RBP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 DPH1Q9BZG8 443 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 HAPLN2Q9GZV7 340 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 EPB41L4AQ9HCS5 686 aaPredicted RBP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 PNPOQ9NVS9 261 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 AFF4Q9UHB7 1163 aaKnown RBP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 USP21Q9UK80 565 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 SLC13A4Q9UKG4 626 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 USP18Q9UMW8 372 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 NOL7Q9UMY1 257 aaKnown RBP6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 AFG3L2Q9Y4W6 797 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 PCDHB4Q9Y5E5 795 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 PCDHA3Q9Y5H8 950 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 PITPNM2Q9BZ72 1349 aa6.17□□□□□ -1.42
TM9SF3-202ENST00000443638 MSTNO14793 375 aa6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 HNRNPDLO14979 420 aaKnown RBP6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 HOXC11O43248 304 aaPredicted RBP6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 MSL3P1P0C860 447 aa6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 FAHP16930 419 aa6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 MC4RP32245 332 aa6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 SLC6A9P48067 706 aa6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 NRG1Q02297 640 aaPredicted RBP6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 MVKQ03426 396 aa6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 FAM110CQ1W6H9 321 aa6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 AGAP9Q5VTM2 703 aa6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 CNKSR3Q6P9H4 555 aa6.16□□□□□ -1.42
TM9SF3-202ENST00000443638 C4orf50Q6ZRC1 276 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms