RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 TYW1Q9NV66 732 aaKnown RBP19.43■□□□□ 0.7
CCDC188-201ENST00000439765 CITO14578 2027 aa19.43■□□□□ 0.7
CCDC188-201ENST00000439765 MYMKA6NI61 221 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 N4BP3O15049 544 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 ZNF131P52739 623 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 SMTNP53814 917 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 CTC1Q2NKJ3 1217 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 EEF1DP3Q658K8 133 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 MYCT1Q8N699 235 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 FSIP1Q8NA03 581 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 TMEM161BQ8NDZ6 487 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 SPIRE2Q8WWL2 714 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 MRPS27Q92552 414 aaKnown RBP19.42■□□□□ 0.7
CCDC188-201ENST00000439765 DDX12PQ92771 950 aa19.42■□□□□ 0.7
CCDC188-201ENST00000439765 MRPL9Q9BYD2 267 aaKnown RBP19.42■□□□□ 0.7
CCDC188-201ENST00000439765 ALG13Q9NP73 1137 aaKnown RBP19.42■□□□□ 0.7
CCDC188-201ENST00000439765 FAM237AA0A1B0GTK4 181 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 A0A1B0GVL5 298 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 K7ENM7 598 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 ITGB1P05556 798 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 MAPTP10636 758 aaKnown RBP19.41■□□□□ 0.7
CCDC188-201ENST00000439765 ITGA4P13612 1032 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 PBX3P40426 434 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 MLH1P40692 756 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 NCKAP1LP55160 1127 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 E2F4Q16254 413 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 NT5DC1Q5TFE4 455 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 ATF7IP2Q5U623 682 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 PTCRAQ6ISU1 281 aaPredicted RBP19.41■□□□□ 0.7
CCDC188-201ENST00000439765 MRPL10Q7Z7H8 261 aaKnown RBP19.41■□□□□ 0.7
CCDC188-201ENST00000439765 SPPL3Q8TCT6 385 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 STAMQ92783 540 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 RNF39Q9H2S5 420 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 TMEM134Q9H6X4 195 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 CWH43Q9H720 699 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 FAM13BQ9NYF5 915 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 GRXCR2A6NFK2 248 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 POLR2DO15514 142 aaKnown RBP19.41■□□□□ 0.7
CCDC188-201ENST00000439765 OFD1O75665 1012 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 IL9P15248 144 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 AKAP5P24588 427 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 LTBRP36941 435 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 AFF1P51825 1210 aaKnown RBP19.41■□□□□ 0.7
CCDC188-201ENST00000439765 NOMO2Q5JPE7 1267 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 FAM178BQ8IXR5 827 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 KLHL23Q8NBE8 558 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 COLGALT1Q8NBJ5 622 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 CNNM3Q8NE01 707 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 ADPGKQ9BRR6 497 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 NTPCRQ9BSD7 190 aaKnown RBP19.41■□□□□ 0.7
CCDC188-201ENST00000439765 TARS2Q9BW92 718 aaKnown RBP19.41■□□□□ 0.7
CCDC188-201ENST00000439765 MRPL4Q9BYD3 311 aaKnown RBP19.41■□□□□ 0.7
CCDC188-201ENST00000439765 TBC1D13Q9NVG8 400 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 HPSEQ9Y251 543 aa19.41■□□□□ 0.7
CCDC188-201ENST00000439765 PDCD11Q14690 1871 aaKnown RBP19.4■□□□□ 0.7
CCDC188-201ENST00000439765 H3BQ06 376 aaPredicted RBP19.4■□□□□ 0.7
CCDC188-201ENST00000439765 ZC3H11AO75152 810 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCDC188-201ENST00000439765 LAG3P18627 525 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 DNAJB1P25685 340 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 HYAL1Q12794 435 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 STRN3Q13033 797 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 HAUS6Q7Z4H7 955 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 SFR1Q86XK3 245 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 HACE1Q8IYU2 909 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 IQUBQ8NA54 791 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 URGCPQ8TCY9 931 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 ZFP42Q96MM3 310 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 GAD1Q99259 594 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 C1QTNF1Q9BXJ1 281 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 GBP3Q9H0R5 595 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 GOLPH3LQ9H4A5 285 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 AAASQ9NRG9 546 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 CLDND1Q9NY35 253 aa19.4■□□□□ 0.7
CCDC188-201ENST00000439765 C5orf42Q9H799 3197 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 TRAK2O60296 914 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 IDEP14735 1019 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 PFKFB1P16118 471 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 NDUFA8P51970 172 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 RNASELQ05823 741 aaKnown RBP19.39■□□□□ 0.69
CCDC188-201ENST00000439765 ZNF568Q3ZCX4 644 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 THNSL1Q8IYQ7 743 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 GPT2Q8TD30 523 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 PPP2R3CQ969Q6 453 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 DNAJC19Q96DA6 116 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 ACO2Q99798 780 aaKnown RBP19.39■□□□□ 0.69
CCDC188-201ENST00000439765 TNMDQ9H2S6 317 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 KLK14Q9P0G3 267 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 ANKFY1Q9P2R3 1169 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 KCNH3Q9ULD8 1083 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 PCDHB12Q9Y5F1 795 aa19.39■□□□□ 0.69
CCDC188-201ENST00000439765 ARL5CA6NH57 179 aa19.38■□□□□ 0.69
CCDC188-201ENST00000439765 H0YCG3 227 aa19.38■□□□□ 0.69
CCDC188-201ENST00000439765 POMCP01189 267 aa19.38■□□□□ 0.69
CCDC188-201ENST00000439765 HARSP12081 509 aaKnown RBP19.38■□□□□ 0.69
CCDC188-201ENST00000439765 NMT1P30419 496 aaKnown RBP19.38■□□□□ 0.69
CCDC188-201ENST00000439765 UBE3AQ05086 875 aa19.38■□□□□ 0.69
CCDC188-201ENST00000439765 DCAF4L1Q3SXM0 396 aa19.38■□□□□ 0.69
CCDC188-201ENST00000439765 KCNT2Q6UVM3 1135 aa19.38■□□□□ 0.69
CCDC188-201ENST00000439765 ENGASEQ8NFI3 743 aa19.38■□□□□ 0.69
CCDC188-201ENST00000439765 POF1BQ8WVV4 589 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms