RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 REEP2Q9BRK0 252 aa23.52■■□□□ 1.36
CPNE1-211ENST00000420363 TDRD15B5MCY1 1934 aaKnown RBP23.52■■□□□ 1.36
CPNE1-211ENST00000420363 TTLL13PA6NNM8 815 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 PRR33A8MZF0 331 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 BRD1O95696 1058 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 ALDH7A1P49419 539 aaKnown RBP23.51■■□□□ 1.35
CPNE1-211ENST00000420363 ZP2Q05996 745 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 RAD51AP2Q09MP3 1159 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 MCM6Q14566 821 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 TMEM132AQ24JP5 1023 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 FOXD4L5Q5VV16 416 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-211ENST00000420363 PDE12Q6L8Q7 609 aaKnown RBP23.51■■□□□ 1.35
CPNE1-211ENST00000420363 CCDC73Q6ZRK6 1079 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 APBB1IPQ7Z5R6 666 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-211ENST00000420363 ADHFE1Q8IWW8 467 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 SLC39A11Q8N1S5 342 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 FOXD4L4Q8WXT5 416 aaPredicted RBP23.51■■□□□ 1.35
CPNE1-211ENST00000420363 MRPS27Q92552 414 aaKnown RBP23.51■■□□□ 1.35
CPNE1-211ENST00000420363 MRPL4Q9BYD3 311 aaKnown RBP23.51■■□□□ 1.35
CPNE1-211ENST00000420363 RNF39Q9H2S5 420 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 TLR9Q9NR96 1032 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 SPG21Q9NZD8 308 aa23.51■■□□□ 1.35
CPNE1-211ENST00000420363 DCXO43602 365 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 ZC3H11AO75152 810 aaKnown RBP eCLIP23.5■■□□□ 1.35
CPNE1-211ENST00000420363 DNAJB1P25685 340 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 BCAR1P56945 870 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 RNASELQ05823 741 aaKnown RBP23.5■■□□□ 1.35
CPNE1-211ENST00000420363 DLX2Q07687 328 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-211ENST00000420363 NT5DC1Q5TFE4 455 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 ATF7IP2Q5U623 682 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 RRAGBQ5VZM2 374 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 TAS1R3Q7RTX0 852 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 CDR2LQ86X02 465 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-211ENST00000420363 TMEM161BQ8NDZ6 487 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 TMEM175Q9BSA9 504 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 NRDE2Q9H7Z3 1164 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 PARVGQ9HBI0 331 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 CFAP45Q9UL16 551 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 TNFSF13BQ9Y275 285 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 HES2Q9Y543 173 aa23.5■■□□□ 1.35
CPNE1-211ENST00000420363 ARL5CA6NH57 179 aa23.49■■□□□ 1.35
CPNE1-211ENST00000420363 SLC16A4O15374 487 aa23.49■■□□□ 1.35
CPNE1-211ENST00000420363 LIG1P18858 919 aa23.49■■□□□ 1.35
CPNE1-211ENST00000420363 GTF2F1P35269 517 aaKnown RBP eCLIP23.49■■□□□ 1.356e-10■■■□□ 14.7
CPNE1-211ENST00000420363 MLH1P40692 756 aa23.49■■□□□ 1.35
CPNE1-211ENST00000420363 NCKAP1LP55160 1127 aa23.49■■□□□ 1.35
CPNE1-211ENST00000420363 KRT17Q04695 432 aa23.49■■□□□ 1.35
CPNE1-211ENST00000420363 GAD1Q99259 594 aa23.49■■□□□ 1.35
CPNE1-211ENST00000420363 TFIP11Q9UBB9 837 aaKnown RBP23.49■■□□□ 1.35
CPNE1-211ENST00000420363 PUF60Q9UHX1 559 aaKnown RBP23.49■■□□□ 1.35
CPNE1-211ENST00000420363 NPHP3-ACAD11A0A0J9YXS1 232 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 C19orf67A6NJJ6 358 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 SFI1A8K8P3 1242 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 FSCN2O14926 492 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 CUTAO60888 179 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 FAM13AO94988 1023 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 KRT18P05783 430 aaKnown RBP23.48■■□□□ 1.35
CPNE1-211ENST00000420363 MAPTP10636 758 aaKnown RBP23.48■■□□□ 1.35
CPNE1-211ENST00000420363 ABCD1P33897 745 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 PBX3P40426 434 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 GIT2Q14161 759 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 DHX8Q14562 1220 aaKnown RBP23.48■■□□□ 1.35
CPNE1-211ENST00000420363 SMAD2Q15796 467 aaKnown RBP23.48■■□□□ 1.35
CPNE1-211ENST00000420363 EEF1DP3Q658K8 133 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 TMEM169Q96HH4 297 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 ACO2Q99798 780 aaKnown RBP23.48■■□□□ 1.35
CPNE1-211ENST00000420363 STK39Q9UEW8 545 aa23.48■■□□□ 1.35
CPNE1-211ENST00000420363 FSD2A1L4K1 749 aa23.47■■□□□ 1.35
CPNE1-211ENST00000420363 MBTPS2O43462 519 aa23.47■■□□□ 1.35
CPNE1-211ENST00000420363 TBCAO75347 108 aaKnown RBP23.47■■□□□ 1.35
CPNE1-211ENST00000420363 GALTP07902 379 aa23.47■■□□□ 1.35
CPNE1-211ENST00000420363 AFF1P51825 1210 aaKnown RBP23.47■■□□□ 1.35
CPNE1-211ENST00000420363 CACNB1Q02641 598 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-211ENST00000420363 DSC1Q08554 894 aa23.47■■□□□ 1.35
CPNE1-211ENST00000420363 GRIK3Q13003 919 aa23.47■■□□□ 1.35
CPNE1-211ENST00000420363 STRN3Q13033 797 aa23.47■■□□□ 1.35
CPNE1-211ENST00000420363 ADAM15Q13444 863 aa23.47■■□□□ 1.35
CPNE1-211ENST00000420363 FAM193BQ96PV7 902 aaPredicted RBP23.47■■□□□ 1.35
CPNE1-211ENST00000420363 POP1Q99575 1024 aaKnown RBP23.47■■□□□ 1.35
CPNE1-211ENST00000420363 APOL6Q9BWW8 343 aa23.47■■□□□ 1.35
CPNE1-211ENST00000420363 PTPRHQ9HD43 1115 aa23.47■■□□□ 1.35
CPNE1-211ENST00000420363 CD207Q9UJ71 328 aa23.47■■□□□ 1.35
CPNE1-211ENST00000420363 LINC01565O15544 149 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 B4GALT3O60512 393 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 POMCP01189 267 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 PROZP22891 400 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 IRS1P35568 1242 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 STAT6P42226 847 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 NDUFV1P49821 464 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 SCNN1GP51170 649 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 SMAD4Q13485 552 aaKnown RBP23.46■■□□□ 1.35
CPNE1-211ENST00000420363 AXDND1Q5T1B0 1012 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-211ENST00000420363 ZPBP2Q6X784 338 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 SV2BQ7L1I2 683 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 ZNF280BQ86YH2 543 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 GSTCDQ8NEC7 633 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 IGSF21Q96ID5 467 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 ZFP42Q96MM3 310 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 RPS6KC1Q96S38 1066 aa23.46■■□□□ 1.35
CPNE1-211ENST00000420363 NGRNQ9NPE2 291 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms