RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TMEM63CQ9P1W3 806 aa33.47■■■□□ 2.95
CSNK1E-206ENST00000413574 UBE4BO95155 1302 aa33.47■■■□□ 2.95
CSNK1E-206ENST00000413574 ADSSP30520 456 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 RABGGTBP53611 331 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 NFKBIBQ15653 356 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 DCAF4L1Q3SXM0 396 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 SEZ6Q53EL9 994 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 MRPL10Q7Z7H8 261 aaKnown RBP33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 PHOSPHO2Q8TCD6 241 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 ELAC1Q9H777 363 aaKnown RBP33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 TGFB1I1O43294 461 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 GJB5O95377 273 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 SKIP12755 728 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 MCL1Q07820 350 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 MORC3Q14149 939 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 NOLC1Q14978 699 aaKnown RBP eCLIP33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 KNOP1Q1ED39 458 aaKnown RBP33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 SNTG2Q9NY99 539 aa33.46■■■□□ 2.95
CSNK1E-206ENST00000413574 FNDC1Q4ZHG4 1894 aaPredicted RBP33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 EOMESO95936 686 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 STAG3L1P0CL83 205 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 AKAP5P24588 427 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 PRCPP42785 496 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 OSTNP61366 133 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 AGMOQ6ZNB7 445 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 TMEM192Q8IY95 271 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 THNSL1Q8IYQ7 743 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 ZBED2Q9BTP6 218 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 GBP3Q9H0R5 595 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 RNF19AQ9NV58 838 aa33.45■■■□□ 2.95
CSNK1E-206ENST00000413574 COL4A6Q14031 1691 aa33.45■■■□□ 2.94
CSNK1E-206ENST00000413574 TRIOBPQ9H2D6 2365 aa33.44■■■□□ 2.94
CSNK1E-206ENST00000413574 MCF2P10911 925 aa33.44■■■□□ 2.94
CSNK1E-206ENST00000413574 PTMSP20962 102 aa33.44■■■□□ 2.94
CSNK1E-206ENST00000413574 CAVIN1Q6NZI2 390 aaKnown RBP33.44■■■□□ 2.94
CSNK1E-206ENST00000413574 A0A0B4J269 797 aa33.43■■■□□ 2.94
CSNK1E-206ENST00000413574 ITGA4P13612 1032 aa33.43■■■□□ 2.94
CSNK1E-206ENST00000413574 CCDC183Q5T5S1 534 aa33.43■■■□□ 2.94
CSNK1E-206ENST00000413574 POMGNT1Q8WZA1 660 aa33.43■■■□□ 2.94
CSNK1E-206ENST00000413574 CBWD1Q9BRT8 395 aa33.43■■■□□ 2.94
CSNK1E-206ENST00000413574 MSTO1Q9BUK6 570 aa33.43■■■□□ 2.94
CSNK1E-206ENST00000413574 KCTD10Q9H3F6 313 aa33.43■■■□□ 2.94
CSNK1E-206ENST00000413574 STYXL1Q9Y6J8 313 aa33.43■■■□□ 2.94
CSNK1E-206ENST00000413574 TRIP11Q15643 1979 aa33.43■■■□□ 2.94
CSNK1E-206ENST00000413574 DGKIO75912 1065 aa33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 KLHL40Q2TBA0 621 aa33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 CLLU1OSQ5K130 101 aa33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 ZBTB41Q5SVQ8 909 aa33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 GUF1Q8N442 669 aaKnown RBP33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 ZSWIM2Q8NEG5 633 aa33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 PGBD4Q96DM1 585 aa33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 PCIF1Q9H4Z3 704 aa33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 MYOGP15173 224 aa33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 CD44P16070 742 aaKnown RBP33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 APBB1IPQ7Z5R6 666 aaPredicted RBP33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 HELQQ8TDG4 1101 aa33.42■■■□□ 2.94
CSNK1E-206ENST00000413574 HSFX4A0A1B0GTS1 333 aaPredicted RBP33.41■■■□□ 2.94
CSNK1E-206ENST00000413574 HSFX3A0A1B0GWH4 333 aaPredicted RBP33.41■■■□□ 2.94
CSNK1E-206ENST00000413574 CLIC2O15247 247 aa33.41■■■□□ 2.94
CSNK1E-206ENST00000413574 PBX2P40425 430 aa33.41■■■□□ 2.94
CSNK1E-206ENST00000413574 AFF1P51825 1210 aaKnown RBP33.41■■■□□ 2.94
CSNK1E-206ENST00000413574 SLFN12LQ6IEE8 588 aa33.41■■■□□ 2.94
CSNK1E-206ENST00000413574 CXCL16Q9H2A7 254 aa33.41■■■□□ 2.94
CSNK1E-206ENST00000413574 AGPAT3Q9NRZ7 376 aa33.41■■■□□ 2.94
CSNK1E-206ENST00000413574 KLK14Q9P0G3 267 aa33.41■■■□□ 2.94
CSNK1E-206ENST00000413574 PARP2Q9UGN5 583 aa33.41■■■□□ 2.94
CSNK1E-206ENST00000413574 TLL1O43897 1013 aa33.4■■■□□ 2.94
CSNK1E-206ENST00000413574 FAM189A1O60320 539 aa33.4■■■□□ 2.94
CSNK1E-206ENST00000413574 PAN2Q504Q3 1202 aaKnown RBP33.4■■■□□ 2.94
CSNK1E-206ENST00000413574 RBM43Q6ZSC3 357 aaKnown RBP33.4■■■□□ 2.94
CSNK1E-206ENST00000413574 YME1L1Q96TA2 773 aa33.4■■■□□ 2.94
CSNK1E-206ENST00000413574 AGO2Q9UKV8 859 aaKnown RBP33.4■■■□□ 2.94
CSNK1E-206ENST00000413574 CITO14578 2027 aa33.4■■■□□ 2.94
CSNK1E-206ENST00000413574 A0A1W2PPC1 479 aa33.39■■■□□ 2.94
CSNK1E-206ENST00000413574 TNFSF9P41273 254 aa33.39■■■□□ 2.94
CSNK1E-206ENST00000413574 GRM5P41594 1212 aa33.39■■■□□ 2.94
CSNK1E-206ENST00000413574 ARMCX5Q6P1M9 558 aa33.39■■■□□ 2.94
CSNK1E-206ENST00000413574 TRIML1Q8N9V2 468 aa33.39■■■□□ 2.94
CSNK1E-206ENST00000413574 ZNF689Q96CS4 500 aaPredicted RBP33.39■■■□□ 2.94
CSNK1E-206ENST00000413574 RSAD1Q9HA92 442 aa33.39■■■□□ 2.94
CSNK1E-206ENST00000413574 RC3H2Q9HBD1 1191 aaKnown RBP33.39■■■□□ 2.94
CSNK1E-206ENST00000413574 RNF216Q9NWF9 866 aaPredicted RBP33.39■■■□□ 2.94
CSNK1E-206ENST00000413574 LCHNA4D1U4 455 aa33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 RECQL4O94761 1208 aa33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 KIF20AO95235 890 aa33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 HTRA4P83105 476 aaPredicted RBP33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 HS2ST1Q7LGA3 356 aa33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 ADSSL1Q8N142 457 aa33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 SAAL1Q96ER3 474 aa33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 ZFP42Q96MM3 310 aa33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 SEMA6BQ9H3T3 888 aa33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 TYW1Q9NV66 732 aaKnown RBP33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 INPP5FQ9Y2H2 1132 aa33.39■■■□□ 2.93
CSNK1E-206ENST00000413574 CHD9Q3L8U1 2897 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 PPP1R3GB7ZBB8 358 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 OGTO15294 1046 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 OFD1O75665 1012 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 GARTP22102 1010 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 MLH1P40692 756 aa33.38■■■□□ 2.93
CSNK1E-206ENST00000413574 ACOT2P49753 483 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms