RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 PIGRP01833 764 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 UBA1P22314 1058 aaKnown RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 ARL2P36404 184 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 POLGP54098 1239 aaPredicted RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 HSP90B2PQ58FF3 399 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 SV2AQ7L0J3 742 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.77□□□□□ -0.85
TDP1-202ENST00000393452 PPM1KQ8N3J5 372 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 EIF1ADQ8N9N8 165 aaKnown RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 EXOC4Q96A65 974 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 DCPSQ96C86 337 aaKnown RBP9.77□□□□□ -0.85
TDP1-202ENST00000393452 GDAP1L1Q96MZ0 367 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 KRT12Q99456 494 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 KIAA1586Q9HCI6 787 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 RAB20Q9NX57 234 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 PSD3Q9NYI0 1048 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 AMFRQ9UKV5 643 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 COG5Q9UP83 839 aa9.77□□□□□ -0.85
TDP1-202ENST00000393452 GSTTP1A0A1W2PQM5 241 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 SOWAHBA6NEL2 793 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 ADM5C9JUS6 153 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 CCDC188H7C350 402 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 AGPSO00116 658 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 DDX3YO15523 660 aaKnown RBP9.76□□□□□ -0.85
TDP1-202ENST00000393452 CEP104O60308 925 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 SORBS3O60504 671 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 ZC3H11AO75152 810 aaKnown RBP eCLIP9.76□□□□□ -0.85
TDP1-202ENST00000393452 RTN2O75298 545 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 CLSTN1O94985 981 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 SGPL1O95470 568 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 FTLP02792 175 aaPredicted RBP9.76□□□□□ -0.85
TDP1-202ENST00000393452 TGFB3P10600 412 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 NAMPTP43490 491 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 RNASE9P60153 205 aaKnown RBP9.76□□□□□ -0.85
TDP1-202ENST00000393452 NNTQ13423 1086 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 TARBP2Q15633 366 aaKnown RBP9.76□□□□□ -0.85
TDP1-202ENST00000393452 SEPT14Q6ZU15 432 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 ZNF771Q7L3S4 317 aaPredicted RBP9.76□□□□□ -0.85
TDP1-202ENST00000393452 NOP9Q86U38 636 aaKnown RBP9.76□□□□□ -0.85
TDP1-202ENST00000393452 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 RPUSD2Q8IZ73 545 aaKnown RBP9.76□□□□□ -0.85
TDP1-202ENST00000393452 CCDC102AQ96A19 550 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 NT5C1BQ96P26 610 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 PCDHB18PQ96TA0 734 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 PCYT2Q99447 389 aa9.76□□□□□ -0.85
TDP1-202ENST00000393452 TOPORSQ9NS56 1045 aaPredicted RBP9.76□□□□□ -0.85
TDP1-202ENST00000393452 DIS3Q9Y2L1 958 aaKnown RBP9.76□□□□□ -0.85
TDP1-202ENST00000393452 NOC2LQ9Y3T9 749 aaKnown RBP9.76□□□□□ -0.85
TDP1-202ENST00000393452 A0A0U1RQG5 324 aaPredicted RBP9.75□□□□□ -0.85
TDP1-202ENST00000393452 ZNF233A6NK53 670 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 CXCL11O14625 94 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 CYP26A1O43174 497 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 RAD51CO43502 376 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 EXTL3O43909 919 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 MTA2O94776 668 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 GLRA2P23416 452 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 IREB2P48200 963 aaKnown RBP9.75□□□□□ -0.85
TDP1-202ENST00000393452 GCNT1Q02742 428 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 C11orf63Q6NUN7 778 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 SND1Q7KZF4 910 aaKnown RBP eCLIP9.75□□□□□ -0.85
TDP1-202ENST00000393452 SLC47A2Q86VL8 602 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 ASAP3Q8TDY4 903 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 AFAP1L1Q8TED9 768 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 PSPC1Q8WXF1 523 aaKnown RBP9.75□□□□□ -0.85
TDP1-202ENST00000393452 CARD9Q9H257 536 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 EPB41L5Q9HCM4 733 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 SEPT11Q9NVA2 429 aaKnown RBP9.75□□□□□ -0.85
TDP1-202ENST00000393452 VPS18Q9P253 973 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 FAN1Q9Y2M0 1017 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 ZSCAN5CA6NGD5 496 aaPredicted RBP9.75□□□□□ -0.85
TDP1-202ENST00000393452 CNMDO75829 334 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 CYP11B1P15538 503 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 CARSP49589 748 aaKnown RBP9.75□□□□□ -0.85
TDP1-202ENST00000393452 LIG4P49917 911 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 GYS2P54840 703 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 GPC5P78333 572 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 FMO1Q01740 532 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 GUCY2DQ02846 1103 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 NEDD9Q14511 834 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 PSMD6Q15008 389 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 PTPROQ16827 1216 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 DCAF12L1Q5VU92 463 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 ENOSF1Q7L5Y1 443 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 ERO1BQ86YB8 467 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 SLC7A3Q8WY07 619 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.75□□□□□ -0.858e-7■■■■■ 32.1
TDP1-202ENST00000393452 DDX1Q92499 740 aaKnown RBP9.75□□□□□ -0.85
TDP1-202ENST00000393452 ZNF516Q92618 1163 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 TMEM143Q96AN5 459 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 BICD1Q96G01 975 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 FAM81BQ96LP2 452 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 FAM213AQ9BRX8 229 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 KCNH4Q9UQ05 1017 aa9.75□□□□□ -0.85
TDP1-202ENST00000393452 SPDYE5A6NIY4 337 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 SART1O43290 800 aaKnown RBP9.74□□□□□ -0.85
TDP1-202ENST00000393452 GRIN3BO60391 1043 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 DLATP10515 647 aaKnown RBP9.74□□□□□ -0.85
TDP1-202ENST00000393452 GGCXP38435 758 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 USP8P40818 1118 aa9.74□□□□□ -0.85
TDP1-202ENST00000393452 RFC5P40937 340 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms