RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 MAPK4P31152 587 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 GRK4P32298 578 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 NPTX2P47972 431 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 GALCP54803 685 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 GYS2P54840 703 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 PPP3CAQ08209 521 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 DAAM2Q86T65 1068 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 SLC30A5Q8TAD4 765 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 CTNNBL1Q8WYA6 563 aaPredicted RBP13.08□□□□□ -0.32
HMGCL-202ENST00000374487 TRIB2Q92519 343 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 USP6NLQ92738 828 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 CDHR1Q96JP9 859 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 PBKQ96KB5 322 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 SENP7Q9BQF6 1050 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 GPR88Q9GZN0 384 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 GOLPH3Q9H4A6 298 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 ACAD9Q9H845 621 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 KMT5AQ9NQR1 393 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 ADAM21Q9UKJ8 722 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 ZHX1Q9UKY1 873 aaPredicted RBP13.08□□□□□ -0.32
HMGCL-202ENST00000374487 TBX20Q9UMR3 447 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 NENFQ9UMX5 172 aa13.08□□□□□ -0.32
HMGCL-202ENST00000374487 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 GOLGA8JA6NMD2 632 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 CES2O00748 559 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 PHACTR2O75167 634 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 PSAPP07602 524 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 ABCB4P21439 1286 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 HOXD10P28358 340 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 PTPROQ16827 1216 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 GNPTABQ3T906 1256 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 SWSAP1Q6NVH7 229 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 LRRC57Q8N9N7 239 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 LMO3Q8TAP4 145 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 LNX1Q8TBB1 728 aaPredicted RBP13.07□□□□□ -0.32
HMGCL-202ENST00000374487 FAM71BQ8TC56 605 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
HMGCL-202ENST00000374487 KIFAP3Q92845 792 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 VTI1AQ96AJ9 217 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 JPH1Q9HDC5 661 aaPredicted RBP13.07□□□□□ -0.32
HMGCL-202ENST00000374487 CYP39A1Q9NYL5 469 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 HPCAL4Q9UM19 191 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 MYH11P35749 1972 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 DENND3A2RUS2 1198 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 MAPK13O15264 365 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 CEP104O60308 925 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 ADORA2AP29274 412 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 CCNA1P78396 465 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 ARHGEF6Q15052 776 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 RIOX2Q8IUF8 465 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 IFT20Q8IY31 132 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 TMEM161BQ8NDZ6 487 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 AENQ8WTP8 325 aaKnown RBP13.07□□□□□ -0.32
HMGCL-202ENST00000374487 ZNF333Q96JL9 665 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 KRT12Q99456 494 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 KIFC3Q9BVG8 833 aa13.07□□□□□ -0.32
HMGCL-202ENST00000374487 GNRH1P01148 92 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 TMEM253P0C7T8 217 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 KCNA2P16389 499 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 CNGA1P29973 690 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 CYP2C19P33261 490 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 USP8P40818 1118 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 MXI1P50539 228 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 TNNC1P63316 161 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 SNRNP35Q16560 246 aaKnown RBP13.06□□□□□ -0.32
HMGCL-202ENST00000374487 SND1Q7KZF4 910 aaKnown RBP eCLIP13.06□□□□□ -0.32
HMGCL-202ENST00000374487 USP38Q8NB14 1042 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 ZSWIM2Q8NEG5 633 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 SLC35G2Q8TBE7 412 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 CCDC127Q96BQ5 260 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 HVCN1Q96D96 273 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 C17orf75Q9HAS0 396 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 SLC9A2Q9UBY0 812 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 PRDM4Q9UKN5 801 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 FAN1Q9Y2M0 1017 aa13.06□□□□□ -0.32
HMGCL-202ENST00000374487 ERICH4A6NGS2 130 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 ATP2A1O14983 1001 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 ZNF862O60290 1169 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 SORBS3O60504 671 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 STAM2O75886 525 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 INHAP05111 366 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 EPHB4P54760 987 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 GRB14Q14449 540 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 CBWD2Q8IUF1 395 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 MAP4K3Q8IVH8 894 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 RFFLQ8WZ73 363 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 SAAL1Q96ER3 474 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 AGPAT1Q99943 283 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 UNC93B1Q9H1C4 597 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 A1CFQ9NQ94 594 aaKnown RBP13.05□□□□□ -0.32
HMGCL-202ENST00000374487 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.05□□□□□ -0.32
HMGCL-202ENST00000374487 SEPT9Q9UHD8 586 aaPredicted RBP13.05□□□□□ -0.32
HMGCL-202ENST00000374487 ANKRD63C9JTQ0 380 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 DGAT1O75907 488 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 RGS20O76081 388 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 HEXIM1O94992 359 aaKnown RBP13.05□□□□□ -0.32
HMGCL-202ENST00000374487 ADSSP30520 456 aa13.05□□□□□ -0.32
HMGCL-202ENST00000374487 AARSP49588 968 aaKnown RBP eCLIP13.05□□□□□ -0.32
HMGCL-202ENST00000374487 GUCY2DQ02846 1103 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms